| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3709 |
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| Symbol | |
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| ID | 6162189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4148704 |
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| End bp | 4149915 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641666482 |
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| Product | hypothetical protein |
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| Protein accession | YP_001792728 |
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| Protein GI | 171060379 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0173811 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTGGA ACACGTTCCT GCTGGCGCTG CGCGAGATCC GCCGCAACCT GCTGCGCGCC
GGCCTCACCA CGCTGGGCAT CGTGATCGGC GTGGCCGCGG TGATCACGAT GGTCACGCTC
GGCAACGGCG CCACGCGCGC GGTCCAGGAC CAGATCTCCA GCCTGGGCAG CAACCTGCTG
ATGGTGCGGC CCGGCCAGCG CCTGGGCCCC GGGCGCGACA CCGCCGGCGC ACCGGCCTTC
AGCATGGCCG ACATCGAAGC CATCGCCGCC CAGGTCGGCG GCCTGCGCGC GGTGGCACCC
GAGGTGCGCA GCGGCGTCAC CGTGGTGGCC GACGGCCGCA ACTGGTCGAC CACCGTCACC
GGCACCACCA ACGAGTACTT CAGCACCAGC AGCTGGGTGC TGGCCAGCGG GCGCAACTTC
AGCGACGAGG AGCTGGCCGG CGGCGCGGCG GTCTGCGTGA TCGGTGCCAC CGTGCAGCGC
GAGCTGTTCG GCGCCGGCAG CGATCCGCTC GGCCAGCGCG TGCGCATCAA GGCGTTTTCG
TGCGAGGTGA TCGGCACGCT GGTCTCCAAG GGCCAGGCCG CGATGGGCCA GGATCAGGAC
GACACCGTGC TGCTGCCGCT GCGCACCGCG CAGCGCCGCG TCACCGGCAG CACCCGCATC
GGCACCGTGC TGGTGGGCAT GCAGGACGGC GCCAGCAGCG CCACCGTCAC CGCCGCGCTG
CGCAGCCTGC TGCGTGAGCG CCGCAAGCTG GCCGACGGCA CGGACGACAA CTTCAACATC
CTCGACACCC GCCAGATCGC CGACACGCTG TCGGGCACCA CCCGGCTGAT GACCTCGCTG
CTCGGCGCAG TGGCGGCGGT GAGCCTGCTG GTGGGCGGCA TCGGCATCAT GAACATCATG
CTGGTGAGCG TGACCGAACG TACCCGCGAG ATCGGCGTGC GCCTGGCCAT CGGCGCGCTC
GAGCGCGAGG TGCTGCTGCA GTTCCTGATC GAGGCGGTGG TGCTGTCGGC GCTGGGCGGG
CTGGTGGGCA TCGCGCTGGC CACCGTGGCT TCGCTCGGGT TGTCGTCGCT GATGGACCTG
CCGTACCTGT TCCAGCCCGG CATCAACCTG CTGGCCTTCG TGTTCTCGGC CGGCATCGGC
GTGGTGTTCG GCTTCGTGCC GGCGCGGCGG GCGGCCAGGC TGGACCCGAT CGAGGCCCTG
CGGCACGAGT GA
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| Protein sequence | MLWNTFLLAL REIRRNLLRA GLTTLGIVIG VAAVITMVTL GNGATRAVQD QISSLGSNLL
MVRPGQRLGP GRDTAGAPAF SMADIEAIAA QVGGLRAVAP EVRSGVTVVA DGRNWSTTVT
GTTNEYFSTS SWVLASGRNF SDEELAGGAA VCVIGATVQR ELFGAGSDPL GQRVRIKAFS
CEVIGTLVSK GQAAMGQDQD DTVLLPLRTA QRRVTGSTRI GTVLVGMQDG ASSATVTAAL
RSLLRERRKL ADGTDDNFNI LDTRQIADTL SGTTRLMTSL LGAVAAVSLL VGGIGIMNIM
LVSVTERTRE IGVRLAIGAL EREVLLQFLI EAVVLSALGG LVGIALATVA SLGLSSLMDL
PYLFQPGINL LAFVFSAGIG VVFGFVPARR AARLDPIEAL RHE
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