| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3708 |
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| Symbol | |
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| ID | 6162808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4147940 |
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| End bp | 4148704 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641666481 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001792727 |
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| Protein GI | 171060378 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.00747361 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGCCCCG CCGAACCCTT GATCCAGTTG CGCGGCATCA CCAAGACCTA CGGCAGCGGC
ACGGCCGCCT TCCTGGCGCT CAAGGGCATC GACCTCGACA TCGCCGCCGG CGAATTCGTC
GCGGTGATGG GGCCGAGCGG CTCGGGCAAG TCGACGGTGA TGAACCTGAT CGGCTGCCTG
GACACGCCCA CATCGGGCGA ATACCGCTTC AGCGACGTGC CCGTGCACAG CCTGAACCGA
GATCAACGCG CGCTGCTGCG GCGGCGCCAC CTCGGTTTCG TCTTCCAGGG TTTCAACCTG
CTGGCGCGCA CCAGCGCGCA GGAGAACGTC GAGCTGCCAC TGCTGTATCG CGGCCTGGGC
CGCGCCGAGC GCCACGCCGC CGCACGCGCC GCGCTGGCCG AGGTCGGCCT GGCCGGCTGG
GAGCACCACG GCCCGGCCGA ACTGTCGGGC GGCCAGCAGC AGCGGGTGGC GATCGCCCGC
GCCATCGTCT CGCGGCCGAC CGTGCTGCTG GCCGACGAGC CGACCGGCAA CCTCGACAGC
GCGCGTGGCA TCGAGATCAT GGAACTGCTG ACGCGCCTGA ACACCGAGCA GGGCATCACC
GTGCTGATGG TGACGCACGA GCCCGAGATG GCGGCGTTCG CGCGCCGCAT CGTCAGGTTC
CGCGACGGCC GCGTCGAGAG CGATCAGCGG CAGGCCGCCC ACGCCGAGCC GCCGCTCGAA
ACCGGCCACG CGCCGGCCAT CACCCCCTCG GCACAGGAGG CCTGA
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| Protein sequence | MSPAEPLIQL RGITKTYGSG TAAFLALKGI DLDIAAGEFV AVMGPSGSGK STVMNLIGCL
DTPTSGEYRF SDVPVHSLNR DQRALLRRRH LGFVFQGFNL LARTSAQENV ELPLLYRGLG
RAERHAAARA ALAEVGLAGW EHHGPAELSG GQQQRVAIAR AIVSRPTVLL ADEPTGNLDS
ARGIEIMELL TRLNTEQGIT VLMVTHEPEM AAFARRIVRF RDGRVESDQR QAAHAEPPLE
TGHAPAITPS AQEA
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