| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3701 |
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| Symbol | |
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| ID | 6163356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4135851 |
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| End bp | 4137338 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641666474 |
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| Product | AMP nucleosidase |
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| Protein accession | YP_001792720 |
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| Protein GI | 171060371 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0775] Nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR01717] AMP nucleosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.507304 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGCA CCCTCATCAC CACCCAGTCC TACACCGACG CGAGCGCCGC GCTGGCGCAC
GCCAAGGCGA TCTACGACAG CGGCATCGCC CACTTGCGCC GGGCTCTGAA AGAGTTCGTC
GGCGGCAACG ACTTCAGCGA GCGGGTGCGC GCCTGCTACC CCTTCGTGCG GGTCAAGATC
GACACCGTCG CACGCGCCGA CTCGCGCCTG GCCTACGGTT TCGTGGCCGG GCCGGGGGTC
TACGAGACCA CGCTGACGCG GCCGGACCTG TTCCGCCACT ACTACCGCGA GCAGTTCGAG
CTGCTGCTCA AGAACCACGG CGTCTGCCTC GAGGTGGGCC TGTCGAGCCA GCCGATCCCG
GTGCATTTCA GCTTTGCCGA ACACGACCAC ATCGAAGGCG CGATGCCGCC CGAGCGTCGC
CAGCTGATGC GCGACCTGTT CGACCTGCCC GACCTGGCGG CGATGGACGA CGGCATCGCC
AACGGCAGCG ACGACCCGAA ACCCGGCCAC GACGGCGTCG TGCGCCATCC GCTGTCGCTG
TTCACCGCGC CGCGCGTGGA CTACTCGCTG CACCGCCTGC GCCACTACAC CGGCACCGCG
CCCGAGCACT TCCAGAACTA CGTGCTGTTC ACGAACTACC AGTTCTACAT CGACGAGTTC
GTGCGGCTGG GCCATGAGCT GATGGCCGAC GAGGCGAGCG AATACGTTGC CTTCGTCGAG
CCCGGCAACG TGCTGACGCG CCGCGCCGGC CTGGCACCCG AACCCGGCGA CCAGCTCGGC
GCACCGCCGC CGCGGCTGCC GCAGATGCCG GCCTATCACC TCAAGCGCCA CGGCCACAGC
GGCATCACGA TGGTCAACAT CGGCGTCGGC CCGGCCAACG CCAAGAACAT CACCGACCAC
ATCGCCGTGC TGCGCCCGCA CGCCTGGCTG ATGCTCGGCC ACTGCGCCGG CCTGCGCAAC
ACCCAGCAGC TCGGCGACTA CGTGCTGGCG CACGGCTATG TGCGCGAGGA CCACGTGCTC
GACGAGGAGC TGCCGCTGTG GGTGCCGATC CCGCCGCTGG CCGAGGTGCA GGTGGCGCTG
GAGCAGGCGG TGGCCGACGT CACCCAGCTG TCGGGCTACG AGCTCAAGAA GATCATGCGC
ACCGGCACGG TGGCGAGCAC CGACAACCGC AACTGGGAGC TGCTGCCGCA CCCGGGTCCG
GAGCGCCGCT TCAGCCAGAG CCGCGCGGTG GCACTGGACA TGGAAAGCGC CACCATCGCC
GCCAACGGCT TCCGTTTCCG CGTCCCCTAC GGCACCTTGC TGTGTGTCAG CGACAAGCCG
CTGCACGGCG AGATCAAGCT GCCCGGCATG GCCAACCAGT TCTACCGCGA GCGGGTCGAC
CAGCACCTGC GCATCGGCAT CCGGGCGATC GAGATCCTGC GCCACCAGGG GCTCGACCAC
CTGCACAGCC GCAAGCTGAG AAGCTTTGCG GAGGTGGCGT TCCAGTAG
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| Protein sequence | MTRTLITTQS YTDASAALAH AKAIYDSGIA HLRRALKEFV GGNDFSERVR ACYPFVRVKI
DTVARADSRL AYGFVAGPGV YETTLTRPDL FRHYYREQFE LLLKNHGVCL EVGLSSQPIP
VHFSFAEHDH IEGAMPPERR QLMRDLFDLP DLAAMDDGIA NGSDDPKPGH DGVVRHPLSL
FTAPRVDYSL HRLRHYTGTA PEHFQNYVLF TNYQFYIDEF VRLGHELMAD EASEYVAFVE
PGNVLTRRAG LAPEPGDQLG APPPRLPQMP AYHLKRHGHS GITMVNIGVG PANAKNITDH
IAVLRPHAWL MLGHCAGLRN TQQLGDYVLA HGYVREDHVL DEELPLWVPI PPLAEVQVAL
EQAVADVTQL SGYELKKIMR TGTVASTDNR NWELLPHPGP ERRFSQSRAV ALDMESATIA
ANGFRFRVPY GTLLCVSDKP LHGEIKLPGM ANQFYRERVD QHLRIGIRAI EILRHQGLDH
LHSRKLRSFA EVAFQ
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