Gene Lcho_3679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3679 
Symbol 
ID6160427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp4113496 
End bp4113948 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content72% 
IMG OID641666452 
Productsignal-transduction protein 
Protein accessionYP_001792698 
Protein GI171060349 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCT GCCTGAAAGA CTTCGCGACG GGGATGGTCG CGGTGGTCGA GCCCGACACC 
CAGGCCCTGG TGGCCGCCCA GCTGATGCGC AAGCACCACG TCGGCGCGCT GGTGGTGGTC 
GACGCGGCCG AGCAGACGCG GCCGGTGGGC ATCGTCACCG ACCGCGACCT GGTGCTGGGC 
CTGATGGCCG AAGGGCTCGA CCCGGCGCTG TTCACGGTGG GCGACATCAT GTCGACCGAC 
CTGGTGCTGG CGCGCCCCGA GATGGACGCG CTCGACGCCG TGGCGCTGAT GCGCGAGCGC 
CGGCTGCACC GCATCATCGT GGTCGACGAC GTCGGCCGGC TGGTCGGCAT CGCCACCGTC 
GACGACGTGC TGGCCGTGCT GGCGCAGGGG CTGCTCGATC TGTCGCGCGG CGCGATCGGC 
GCACGCGACC GCGAGTTCGA GCAGCGCGCC TGA
 
Protein sequence
MPTCLKDFAT GMVAVVEPDT QALVAAQLMR KHHVGALVVV DAAEQTRPVG IVTDRDLVLG 
LMAEGLDPAL FTVGDIMSTD LVLARPEMDA LDAVALMRER RLHRIIVVDD VGRLVGIATV 
DDVLAVLAQG LLDLSRGAIG ARDREFEQRA