Gene Lcho_3661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3661 
Symbol 
ID6161743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp4088609 
End bp4089904 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content68% 
IMG OID641666434 
Productbenzoyl-CoA oxygenase/reductase, BoxA protein 
Protein accessionYP_001792680 
Protein GI171060331 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0369] Sulfite reductase, alpha subunit (flavoprotein) 
TIGRFAM ID[TIGR03224] benzoyl-CoA oxygenase/reductase, BoxA protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCC CCACCGACGC CGCCGTCATC AAGCAACACC TGATCGACCC CGAGATCTGC 
ATCCGCTGCA ACACCTGCGA GGCGATCTGC CCGGTGCAGG CGATCACGCA CGACTCGCGC
AACTACGTGG TCGACGCGGT CAAGTGCAAC CTGTGCATGG CCTGCATCTC GCCCTGCCCG
ACCGGCTCGA TCGACAACTG GCGCACCATG CCACGCGTGG TGGCCTACAG CATCGAGGAT
CAGTTCGGCT GGGACGAACT GCCGGCTGAA CTGACCGCCG ACCAGTTGGC CGAGGCCGGC
GTGTCCGCCG ATGCGGCGCC TGCGCTCGAA CCCGTCACGC CGTCGCTGCC GGCTGCGGCC
ACGGGCGAGA CGGCGTTCAA CAGCGCGCAG TACGGCGCGT CGCTGCCGCC CTGGTCGGCC
GCGCATGCCT ACACCAACCT CTACGGCGCC AAGGCGGCCG AGAAGTCGAT CACCGCCACC
GTGACCGGCA ACGTGCGCGT CACCGAGGTC GGCACCCAGG CCGGCCACGA CTACGACACC
CACCACATCG TGCTCGACTT CGGCGCGATG CCCTTCCCGG TGCTCGAAGG CCAGTCGATC
GGCATCGTGC CACCCGGTGT CGACGCCAAG GGCCGCCCGC ACCATGCCCG CCAGTATTCG
ATCGCCAGCC CGCGCAACGG CGAGCGGCCG GGCTACAACA ACCTGTCGCT GACCATCAAG
CGGGTGCTCG AAGATCACGC CGGCAACGCC GTGCGCGGCG TCGGCAGCAA CTACATGTGC
GACCTGCAGG TGGGCGACAA GGTGCAGGTG ATCGGGCCGT TCGGCGCGAG CTTCCTGATG
CCCAACCATC CGCGCAGCAA CATCGTGATG ATCTGCACCG GCACCGGCTC GGCGCCGATG
CGGGCGATGA CCGAATGGCG CCGCCGTCTG CGCAGTTCGG GCAAGTTCGA GGGCGGCAAG
CTGATGCTGT TCTTCGGCGC GCGCACCAAG GAGGAGCTGC CCTACTTCGG CCCGCTGCAG
AACCTGCCGA AGGATTTCAT CGACCTGCAC TTCGCCTTCT CCCGCACGCC GGGCCAGCCC
AAGCGCTACG TGCAGGACCT GATGCGCGAA CGCGCCGCCG ACCTGGCGCC GCTGCTGGCC
GACCCGAACA CCTGCTTCTA CGTCTGCGGC TTGAAGAGCA TGGAAGAAGG CGTGGTGCTG
GCGCTGCGCG ACGTGGCGCA GCAGGCCGGG CTGAACTGGG ACACGGTCGG TGCCGCGCTG
AAGCAGCAGG GCCGCCTGCA CCTCGAAACC TATTGA
 
Protein sequence
MNAPTDAAVI KQHLIDPEIC IRCNTCEAIC PVQAITHDSR NYVVDAVKCN LCMACISPCP 
TGSIDNWRTM PRVVAYSIED QFGWDELPAE LTADQLAEAG VSADAAPALE PVTPSLPAAA
TGETAFNSAQ YGASLPPWSA AHAYTNLYGA KAAEKSITAT VTGNVRVTEV GTQAGHDYDT
HHIVLDFGAM PFPVLEGQSI GIVPPGVDAK GRPHHARQYS IASPRNGERP GYNNLSLTIK
RVLEDHAGNA VRGVGSNYMC DLQVGDKVQV IGPFGASFLM PNHPRSNIVM ICTGTGSAPM
RAMTEWRRRL RSSGKFEGGK LMLFFGARTK EELPYFGPLQ NLPKDFIDLH FAFSRTPGQP
KRYVQDLMRE RAADLAPLLA DPNTCFYVCG LKSMEEGVVL ALRDVAQQAG LNWDTVGAAL
KQQGRLHLET Y