Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3646 |
Symbol | |
ID | 6162683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 4072406 |
End bp | 4072720 |
Gene Length | 315 bp |
Protein Length | 104 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641666419 |
Product | small multidrug resistance protein |
Protein accession | YP_001792665 |
Protein GI | 171060316 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2076] Membrane transporters of cations and cationic drugs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTGGA CACTCCTCTT CTTCGCCGGC CTGTTCGAGA TCGGCTGGGC CATCGGCCTC AAGTACACCG AGGGTTTCAC GAAGCCCTTG CCGACCGCGC TCACGCTGGC CTCGATGGTC GCGAGCGTCG GTCTGCTCGG CCTGGCGATA CGGGACCTGC CGGTCGGCAC CGCCTATGCG GTCTGGACCG GCATCGGTAC CGTCGGCACG GTGATCCTCG GCATCGTGCT GATGGGCGAC TCGGCGGCTG CCCTGCGTCT CGTGTGCCTG GGGCTGATCC TGCTCGGGAT CGTGGGCCTG AAGGTGTTGA GCTGA
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Protein sequence | MPWTLLFFAG LFEIGWAIGL KYTEGFTKPL PTALTLASMV ASVGLLGLAI RDLPVGTAYA VWTGIGTVGT VILGIVLMGD SAAALRLVCL GLILLGIVGL KVLS
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