Gene Lcho_3646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3646 
Symbol 
ID6162683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp4072406 
End bp4072720 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content67% 
IMG OID641666419 
Productsmall multidrug resistance protein 
Protein accessionYP_001792665 
Protein GI171060316 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTGGA CACTCCTCTT CTTCGCCGGC CTGTTCGAGA TCGGCTGGGC CATCGGCCTC 
AAGTACACCG AGGGTTTCAC GAAGCCCTTG CCGACCGCGC TCACGCTGGC CTCGATGGTC
GCGAGCGTCG GTCTGCTCGG CCTGGCGATA CGGGACCTGC CGGTCGGCAC CGCCTATGCG
GTCTGGACCG GCATCGGTAC CGTCGGCACG GTGATCCTCG GCATCGTGCT GATGGGCGAC
TCGGCGGCTG CCCTGCGTCT CGTGTGCCTG GGGCTGATCC TGCTCGGGAT CGTGGGCCTG
AAGGTGTTGA GCTGA
 
Protein sequence
MPWTLLFFAG LFEIGWAIGL KYTEGFTKPL PTALTLASMV ASVGLLGLAI RDLPVGTAYA 
VWTGIGTVGT VILGIVLMGD SAAALRLVCL GLILLGIVGL KVLS