| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3645 |
|---|
| Symbol | |
|---|
| ID | 6162682 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 4071028 |
|---|
| End bp | 4072317 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641666418 |
|---|
| Product | cytochrome P450 |
|---|
| Protein accession | YP_001792664 |
|---|
| Protein GI | 171060315 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2124] Cytochrome P450 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCG TGCTGCGGCC GGTCGGTCAG CCGCTCGGCC GGCCCATCGT CGACGCCGCT
TTCCTCGCCG ACCCCTACCC GACCTACGCC GCGCTGCGCG AGGCCGGGCC GATGCACTGG
AGCGACGAGT TCTTCGGCGG CGCCTGGGTG TTGACGCGGC ATGCCGACGT CGACGCGGTG
CTGCGCGACG ACGCCCGTTT CTCGGCCCAG CGCACCGGTG GCTGGGTGAT GGGCAGCGAC
GACACGACCA GCCCGGACGC GCTCAACAGC CGCGCCGAGC TGCAGGACTT CCAGCGCCTG
TTCGCCCGCG CGATGCTGTT CATCGACGCG CCCGATCACC AGCGCCTGCG CGGCGTGATG
AACGCAGGCT TCCGTGGCGA TCAGCTCGAA CGGCTGCGCC CGGGCATCGA GCGCTGGATC
GACCAGCGCT TCGATGCGAT CGACGCCAAG GGTCAGGCCG GCAGCGGGTT CGATTTCATG
GCACAGATCG CCCGGCCGAT GCCCGCGCAG GTGATCGCCA CGCTGATGGG CATCACCGAG
GCCGACCGCG GCGACTTCAT CGCCTGGTCG GACGACCTGG CCGATTTCAT CGGCGCGCCG
ATGCCCACGC GCGAGCTGAC CCGGCGTGCG CGCATCAGCC TGCTGGCGAT GGCGCGCTAC
TTCGAGCAGC TCACCGCGCA GCGCCGCCGG CAGCCCGGCG ACGACCTCGT CAGCCGGCTG
GTGCAGGGCG AGGCACGCGG CCAGATCCAG CCCGGCGCCG AGATGCTGGC GCAGTGCGCG
ATGCTGCTGT TCGCCGGCCA CGAGACCACC CGCAACCTGC TCGGCAACGG CCTGCACGCG
CTGCTGGCCG AGCCGGGGCA CTGGCAGCGC CTGCAAGACG AACCGGCCTT GCTGCCGGGC
GCCGTGCGCG AGCTGCTGCG CCACGAGAGC CCGGTGCAGT ACACCGGCCG ACGGGTCGCG
ACCGACCTGG TGCTGCACGG CCAGCTGCTG CGCCGCGGCG ATCTGGTGGT CGGGCTGATC
GGCTCGGCCA ACCGCGATCC GGCGCGTTAC GAGCAGCCCG ATCGGCTCGA CCTGGCACGC
CGCGCCGCGC CGTCGCTGTC GTTCGGCGCC GGGCCGCACG TGTGCATCGG CGCGTCGCTG
ACGCTGATGG AGGCGCAGAT CCTGTTCAGC CGCGCGCTGC AGCGCTGGCC GGGGCTGCAG
TTGGTGGATG CCACGCCGCG CTGGAACGGC AACCCGGTGT ACCGCGGGCT GCAGTCGCTG
CGGGTGATCG CGCCGGCCAC GCCCGACTGA
|
|---|
| Protein sequence | MSAVLRPVGQ PLGRPIVDAA FLADPYPTYA ALREAGPMHW SDEFFGGAWV LTRHADVDAV
LRDDARFSAQ RTGGWVMGSD DTTSPDALNS RAELQDFQRL FARAMLFIDA PDHQRLRGVM
NAGFRGDQLE RLRPGIERWI DQRFDAIDAK GQAGSGFDFM AQIARPMPAQ VIATLMGITE
ADRGDFIAWS DDLADFIGAP MPTRELTRRA RISLLAMARY FEQLTAQRRR QPGDDLVSRL
VQGEARGQIQ PGAEMLAQCA MLLFAGHETT RNLLGNGLHA LLAEPGHWQR LQDEPALLPG
AVRELLRHES PVQYTGRRVA TDLVLHGQLL RRGDLVVGLI GSANRDPARY EQPDRLDLAR
RAAPSLSFGA GPHVCIGASL TLMEAQILFS RALQRWPGLQ LVDATPRWNG NPVYRGLQSL
RVIAPATPD
|
|---|
| |