Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3643 |
Symbol | |
ID | 6162680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 4069190 |
End bp | 4069900 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641666416 |
Product | dethiobiotin synthase |
Protein accession | YP_001792662 |
Protein GI | 171060313 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0132] Dethiobiotin synthetase |
TIGRFAM ID | [TIGR00347] dethiobiotin synthase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTCA AAGGTGTGTT TGTCACCGGC ACCGACACCG AGGTCGGCAA GACCTGCGTC AGCGCCGGCC TGCTGCACTG GTTCGGCCAG GCCGGCCATC GCAGCGCCGG GCTCAAGCCG GTGGCCGCGG GCACCATGCT GATCGACGGC GTGGCGGTCA ACGAAGACGT GCGCGCGCTG CGCGACGCCA GCTCGGTCAC GTTGACCGAC GCCGAGGTCG GCCCCAACCA GTTCACGCAA GCCTGCGCGC CGCACATCGC CGCCGCGCAC GAGGGCCGCG CCATCGACCG ACAGGCCTTG CGCGACGCCG CGCAAACACT CGCCGCCCGC GCCGACTGGC TGGTGGTCGA AGGGGTCGGC GGCTTCTGCG TGCCCTTCGG CGCCGACTGG GACAGCGCCG ACCTGGCCTG CGACCTGGCC CTGCCGGTGG TGCTGGTGGT CGGCCTGCGG CTGGGCTGCC TGAACCACGC GCTGCTCAGC GCCGAGGCCA TCCGCAGCCG CGGCTTGCGG CTGGCCGGCT GGGTCGGGAA TGTGCTGACC GAGCCGATGC TGCACTGCAG CGAGAATGTC GCCACCCTGA ACCACGAGTT CGGGCGGCGC CACCAGGCGG TCTGCCTGGG CCTGATCCCG CGGCTTGCCG ACACCCGTCC GGCGGCCGTG GCCGCCCATT TCGATGCCGC GGCGCTGCGC CGGGCATTCG CGTTGAAGTG A
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Protein sequence | MTFKGVFVTG TDTEVGKTCV SAGLLHWFGQ AGHRSAGLKP VAAGTMLIDG VAVNEDVRAL RDASSVTLTD AEVGPNQFTQ ACAPHIAAAH EGRAIDRQAL RDAAQTLAAR ADWLVVEGVG GFCVPFGADW DSADLACDLA LPVVLVVGLR LGCLNHALLS AEAIRSRGLR LAGWVGNVLT EPMLHCSENV ATLNHEFGRR HQAVCLGLIP RLADTRPAAV AAHFDAAALR RAFALK
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