| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3609 |
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| Symbol | |
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| ID | 6161770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4029673 |
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| End bp | 4031421 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641666382 |
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| Product | alkaline phosphatase |
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| Protein accession | YP_001792628 |
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| Protein GI | 171060279 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3540] Phosphodiesterase/alkaline phosphatase D |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0107894 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAACG CCCTCAATCG CCGCGACTTT CTCGTCAGAA CCTCGACCGT GGCCACGCTG
GCAGCCGTCG GCGGCACGCT CGCGGCCTGC GGCGGTGGCG ACGACACGCC GGCCGATTTC
CGCTACGGCG TGGCCAGCGG CGATCCGCTG GCCGACCGGG TGATCCTGTG GACCCACGCC
AAGCGCCCGG ACAGCAACGA CGCCGTCGGC CTGACCTGGC AGGTGGCCAG CGATGCCGCC
TTCGCCAGCG TGCTGCGCTC GGGCCGTGTC ACCGCGAGCG AGGCCACCTC GTTCACCGCC
AAGGTCGATG CCACCGGGCT CACCGCGGGC ACGAGCTACT TCTATCGCTT TCTCGACGAC
GCCGGTGGTG TCTCCACCGT GGGCAGCACG CGCACCCTGC CGGCGGCCGA CGCCACGTCG
GTCAAGTTCG CGGTGTTCTC GTGCGCGCTG TACTCCGAAG GCTTCTTCAA CGCCTACGAC
TCGGCCGCCA CCTCGGACGC GCAATACGCC GTGCACCTGG GCGACTACCT CTACGAATAC
GGCGCCGATC CGGCGAAGTT CGGCAACACC GATGCGGTGA GCCTGGGCCG CGTCATCGTG
CCGTCCAACG ACATGGTCAG CCTGAGCGAC TACCGCACGC GCTATGCCCT GTACCGCGCC
GATGCCAAGC TGCAGGCGCT GCACGCCAAG ATGCCGTGGA TCACGGTGTG GGACGACCAC
GAGTTCGCCA ACAACGCCTA CAACAGCGTC GACGGCAGCG GTGCCGAGAA CCACGACCCG
GCCACGCAGG GCGACTGGAA CACCCGCAAG GCGATCGCGG CGCGGGTCTA TCACGAGTGG
ATGCCGATCC GCACGCCCGA CACCACCGAC CTGCTGAAGA TCTACCGCCG CTTCGACTTC
GGCCGCCTGT TCACGCTGCA CATGCTCGAC ACCCGCATCG AGGGGCGCGA CCGCCAGTAC
GACAGCTTCG GCGATGCCGA TGGCGGCTAC AACCGTTACG GCACCGCCCT GGCCACCGGC
AGCGATGCCA GCCGCCGCAT GATCAGCGCC GCCCAGCAGG CCTGGCTCAC CGACGGCATG
GCGGCCTCGA CCGCGACCTG GCAGGTGCTC GGCAATCAGG ACATCATGGC CCGCATGTGG
ATCCCCGCCT CGGTGCTGAG CCTGGCGAGC GACCCGGCCG CAGCCCAGCC CGCCATCGGC
GCCTACCTCA CCGCCAAGGC CACGGCCGCT GCCGGTGGCC CGCTGACCGC CACCCAGACC
GGCCTGCTCG ACACCGCCGT CAACCCGCTG CTGCCCTACA ACCTCGACGC CTGGGACGGC
TATCCGCTGC AACGCGAAGC CTTGCTGCAG ACCGTCAAGG CGCAGGGCAA GAAGCTGGTG
GCGCTGTCGG GCGATTCGCA CAACGCCTGG TTCAACCACC TCACCACCTT GAGCGGCGAG
AAGATCGGCG TCGAGTTCGC CGGCTCGTCG GTCACGTCGC CGGGTTTCGA GAGTGTCGGC
CTGGGCGGCC TGGCCAGCTC GCTCGACGGC AGTGCCGTGT CGCCCGGCTC CAACGGCACC
GGCCTGGGCC TGATCTCCGA CCTGAACTAT GCCGACACGA TCCGCCGCGG CTATCTGCTG
ATGACCGTCA CCGACGCCGC CGTGACGGGC GAGTTCGTCT ACGTCAGCAC GGTCAAGTCG
ACCACCTACA CGGCCGCCGT GGGCAAGACC ATCAGCGTGT CGGTCGGCGG CGCCATCAGC
TACGCCTGA
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| Protein sequence | MSNALNRRDF LVRTSTVATL AAVGGTLAAC GGGDDTPADF RYGVASGDPL ADRVILWTHA
KRPDSNDAVG LTWQVASDAA FASVLRSGRV TASEATSFTA KVDATGLTAG TSYFYRFLDD
AGGVSTVGST RTLPAADATS VKFAVFSCAL YSEGFFNAYD SAATSDAQYA VHLGDYLYEY
GADPAKFGNT DAVSLGRVIV PSNDMVSLSD YRTRYALYRA DAKLQALHAK MPWITVWDDH
EFANNAYNSV DGSGAENHDP ATQGDWNTRK AIAARVYHEW MPIRTPDTTD LLKIYRRFDF
GRLFTLHMLD TRIEGRDRQY DSFGDADGGY NRYGTALATG SDASRRMISA AQQAWLTDGM
AASTATWQVL GNQDIMARMW IPASVLSLAS DPAAAQPAIG AYLTAKATAA AGGPLTATQT
GLLDTAVNPL LPYNLDAWDG YPLQREALLQ TVKAQGKKLV ALSGDSHNAW FNHLTTLSGE
KIGVEFAGSS VTSPGFESVG LGGLASSLDG SAVSPGSNGT GLGLISDLNY ADTIRRGYLL
MTVTDAAVTG EFVYVSTVKS TTYTAAVGKT ISVSVGGAIS YA
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