| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3604 |
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| Symbol | |
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| ID | 6161838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4023724 |
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| End bp | 4024596 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641666377 |
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| Product | phosphatidylserine decarboxylase |
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| Protein accession | YP_001792623 |
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| Protein GI | 171060274 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0688] Phosphatidylserine decarboxylase |
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| TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.247299 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCCA ATCTTCTGCA ACGGATCTTC CTTCAGGAGG ATCTCAACTT CCTGTTCACC
AACCGCGTGC CGCGCATCGC GCTGACCCGG GCGATGGGCT GGTTCAGCCA GATCCGCAGC
CCGCTGCTGG CACGCGCGTC GATCGCGGTC TGGCGGCTGT TCACCGACCT CGACCTGAGC
GATGCGCGCC AGCAGCGCTT TGCCAGCCTG CACGAGTGCT TCACGCGCGA GCTCAGACCC
GGCGCACGCA CGATCGACCC CGATGCCGAC GTGCTGTGCA GCCCGAGCGA CGCGATCGTC
GGCGCCTGCG GCGACGTGCA GGGCACGCAG CTGTTCCAGG CCAAGGGCTT TCCGTACGCG
CTGGGCGACC TGTTCGGGCC GACGCAGGAC AGCACGCCGT TCCACGACGG TGTCTACGTC
ACGCTGCGGC TGACCTCGGC GATGTACCAC CGCTTCCATG CGCCGCACGA CCTCGAGGTC
GACCACGTCA CCTACCTGAG CGGCGACACC TGGAACGTCA ACCCGATCGC GCTCAAACGG
GTCGAGCGGC TGTTCTGCCG CAACGAGCGC GCGGTGCTGC GCACGCGGCT GTCACGTGGC
GGTCAGCCGA TCGCGATCGT GCCGGTGGCG GCGATCCTGG TGGCGAGCAT GCGCTTCCAC
TTTCTCGACG TGCTGCTGCA TCTGCGCTAT CGCGGCCCGC ACGAGATCGC CTGCCGCGCG
CACTACGCCA AGGGCGAGGA GATGGGCTGG TTCCAGCACG GCTCCACGAT CATCGTGTTC
GCCCCCAGGG GTTTCACGTT GAGCGAGGGC ATCGAGCCCG GTGCCCGCAT CCGGATGGGC
CGGGCCCTGC TGCAGCTGCC GACCGAGCCT TGA
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| Protein sequence | MKPNLLQRIF LQEDLNFLFT NRVPRIALTR AMGWFSQIRS PLLARASIAV WRLFTDLDLS
DARQQRFASL HECFTRELRP GARTIDPDAD VLCSPSDAIV GACGDVQGTQ LFQAKGFPYA
LGDLFGPTQD STPFHDGVYV TLRLTSAMYH RFHAPHDLEV DHVTYLSGDT WNVNPIALKR
VERLFCRNER AVLRTRLSRG GQPIAIVPVA AILVASMRFH FLDVLLHLRY RGPHEIACRA
HYAKGEEMGW FQHGSTIIVF APRGFTLSEG IEPGARIRMG RALLQLPTEP
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