| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3600 |
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| Symbol | |
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| ID | 6162593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4018249 |
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| End bp | 4019793 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641666373 |
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| Product | Ppx/GppA phosphatase |
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| Protein accession | YP_001792619 |
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| Protein GI | 171060270 |
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| COG category | [F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0248] Exopolyphosphatase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.446483 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAGC CCCAACCCAG CGATCCCGTC CGCCCGGCCA CCGGTCATGC CAGCAGCAGC
GCCTGGCGCG GCGTGCTCGC GTCGATCGAC ATGGGCTCGA ACAGCTTCCG GCTCGAGATC
GGCCGCAGCA GCGCCAGCCG CTACCGGCGC ATCGACTACC TGAAGGAAAC CGTGCGCCTG
GGCGCCGGGC TCGGCCCGGA CGGTCGACTG AGCGACGAGG CCGCGCAGCG CGGCCTCGCC
TGCCTGGCGC GCTTTCGCCA GCGCCTGGAC GGCATCGCGC CGACGCAGCT GCGCGCGGTC
GCCACCCAGA CCCTGCGCGA GGCCACCAAC CGCGACGAGT TCCTGCGCCT GGCTGGCGCC
ACGCTGGGCC ATCCGATCGA GGTGATCTCG GGGCGCGAGG AGGCCCGCCT GATCTACAAG
GGCGTGGCAC GCCTGCAGCC CTGCGAGGCC CCACGGCTGG TGATCGACAT CGGCGGGCGC
TCGACCGAGA TGATCATCGG CCACGGCGCC CACGTGATCC GGGCCGAGTC GTTCCGGGTC
GGCAGCGTCA GCCTGTCGAT GCAGTTCTTC CCGGACGGAC GCTTCACGAC GGCCGCCTTC
CAGGCCGCGC AGGTGGCCGC CGGCGCCGAG CTCGAGGAGG CGCTGGTGCC GTTCGCGCGC
CAGCACTGGC GCGACGCGCT GGGCTCGTCG GGCACCGCCG GCGCGGTGTC GGACCTGCTG
CGCGCCAACG GCGTGACCGA CGGCCGCATC ACGCCCGAGG CCTTGCGCTG GTGCATGCGC
GCCTGCCTCG AAGCCGGCTC GGCCGACCGG CTGCAGCTGC CCGGCCTGAA GCCCGACCGG
CGCGCGGTGC TGGGCGGCGG GCTCGCCATC CTCTACACGC TGGCGACCCA TTTCGAGATC
GACGGCCTGC TGCCCGCGCG CGGTGCGCTG CGCCAGGGCG TGATCTTCGA CCTCGAGGAG
CGCCGCGCCG CCGAGCGCCA TGCCGTGCAC CACGACATGC GCGACGACAG CGTGGCCGAG
CTGCAGCAGC GTTTCGGCGT CGACCGCGGC CAGGCGCGGC GGGTCGAGGC GCTGGCGCAG
AACCTGTACC GGCAGATCGC GCCGCAATCG AGCCTCGAGC TGCACCGAGA GCTCGGCTGG
GCCGCGGCGC TGCACGAGAT CGGCATGATG GTGTCGCACC ACGACCACCA CCGCCACAGC
GCCTACCTGC TCGGCCACGT CGACGCGGCC GGTTTCTCGC AGAGCCAGCA GCGCGGCCTG
GCCGAGCTGG TGCTGGGCCA GCGCGGCGGG CTGCGCAAGG TCGAGGCCGT GTGGTCGGAC
GCCGAGCGCA TGCGCCAGCT GCTGGCACTG CGCCTGGCGG TGCTGCTGTG CCACGCCCGG
CTGGAGCCGC CGCAGGGCCT GCAGCTGGCC ATCAGCGGCC GCGAGATCCG CCTCGGCTGG
CCACCCGCCT GGGCCGCGCG CCAGCTGCGC AGCGTCTACC TGCTGCGCGA GGAGGCCGAG
GACTGGCGGC GCATCGCCGG CTGGCGGGTC GAGCTGCCAG CCTGA
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| Protein sequence | MIEPQPSDPV RPATGHASSS AWRGVLASID MGSNSFRLEI GRSSASRYRR IDYLKETVRL
GAGLGPDGRL SDEAAQRGLA CLARFRQRLD GIAPTQLRAV ATQTLREATN RDEFLRLAGA
TLGHPIEVIS GREEARLIYK GVARLQPCEA PRLVIDIGGR STEMIIGHGA HVIRAESFRV
GSVSLSMQFF PDGRFTTAAF QAAQVAAGAE LEEALVPFAR QHWRDALGSS GTAGAVSDLL
RANGVTDGRI TPEALRWCMR ACLEAGSADR LQLPGLKPDR RAVLGGGLAI LYTLATHFEI
DGLLPARGAL RQGVIFDLEE RRAAERHAVH HDMRDDSVAE LQQRFGVDRG QARRVEALAQ
NLYRQIAPQS SLELHRELGW AAALHEIGMM VSHHDHHRHS AYLLGHVDAA GFSQSQQRGL
AELVLGQRGG LRKVEAVWSD AERMRQLLAL RLAVLLCHAR LEPPQGLQLA ISGREIRLGW
PPAWAARQLR SVYLLREEAE DWRRIAGWRV ELPA
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