Gene Lcho_3599 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3599 
Symbol 
ID6162592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp4017014 
End bp4017940 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content67% 
IMG OID641666372 
Productelectron transfer flavoprotein alpha subunit 
Protein accessionYP_001792618 
Protein GI171060269 
COG category[C] Energy production and conversion 
COG ID[COG2025] Electron transfer flavoprotein, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.460785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTC TCGTCATTGC CGAACACGAA CATGGCGCAC TGAAGGGCGC CACGCTCAAC 
ACCGTTACCG CCGCAGCCCA ACTGGGCGAG GTCCATGTGC TGGTGGCCGG TGCCGATTGC
GCCGCTGCAG CACAAGCTGC AAGCCAGATC GCCGGCGTCA CCAAGGTGCT GCACGCCGAT
GGCGCGAGCC TCGGAGAGCA GCTCGCCGAG AACATCACCG CGCAGGTGAT CGCTGTCGCA
TCGAACTACA GCCACATCCT CTTTGCTGCC ACCGCACATG GCAAGAACGT CGCTCCGCGC
GTGGCCGCCA AGCTCGACGT GGCGCAGATC AGCGAGATCA CCAAGGTGAT CAGCGCCGAC
ACCTACGAGC GCCCGATCTA CGCCGGCAAC GCCGTCGCCA CGGTGCAGAG CAGCGACAAG
ATCCAGGTCA TCACCGTGCG CACCACCGGC TTCGACGCCG CGGCGCTCGG TGGATCGGCT
CCGATCGAAA CCATCGCCGC GGTGGCCGAC AGCGGCAAGA GCGCCTTCGT CGGCAGCGAG
ATCGCCAAGA GCGACCGGCC CGAACTGACG GCGGCCAAGA TCATCGTCAG CGGCGGCCGT
GCGATGGGCA GCAGCGACAA GTTCAACGAC GTGCTGACGC CGCTCGCGGA CAAGCTCGGC
GCCGCGCTCG GTGCCAGCCG CGCGGCGGTC GACGCGGGCT ACGCACCCAA CGACTGGCAG
GTCGGCCAGA CCGGCAAGAT CGTGGCACCC AGCCTGTACA TCGCCTGCGG CATCAGCGGC
GCGATCCAGC ACCTGGCGGG CATGAAGGAC AGCAAGGTGA TCGTGGCGAT CAACAAGGAC
GCCGAGGCAC CGATCTTCAG CGTGGCCGAC TACGGGCTGG AGGCCGACCT GTTCGTGGCC
GTGCCGGAGC TGGTGAAGGC GCTCTGA
 
Protein sequence
MTALVIAEHE HGALKGATLN TVTAAAQLGE VHVLVAGADC AAAAQAASQI AGVTKVLHAD 
GASLGEQLAE NITAQVIAVA SNYSHILFAA TAHGKNVAPR VAAKLDVAQI SEITKVISAD
TYERPIYAGN AVATVQSSDK IQVITVRTTG FDAAALGGSA PIETIAAVAD SGKSAFVGSE
IAKSDRPELT AAKIIVSGGR AMGSSDKFND VLTPLADKLG AALGASRAAV DAGYAPNDWQ
VGQTGKIVAP SLYIACGISG AIQHLAGMKD SKVIVAINKD AEAPIFSVAD YGLEADLFVA
VPELVKAL