Gene Lcho_3598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3598 
Symbol 
ID6162591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp4016262 
End bp4017011 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content62% 
IMG OID641666371 
Productelectron transfer flavoprotein alpha/beta-subunit 
Protein accessionYP_001792617 
Protein GI171060268 
COG category[C] Energy production and conversion 
COG ID[COG2086] Electron transfer flavoprotein, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.45948 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCAT TGGTGAGTGT GAAACGGGTG GTCGACTACA ACGTCAAGGT TCGCGTCAAG 
AGTGACGGCA CGGGCGTGGA CATCGCCAAC GTCAAGATGA GCATGAACCC GTTCGACGAG
ATCGCGATCG AGGAGGCGGT GCGCCTGCGT GAGAAGGGTG TGTTGACTGA AGTGATCGCC
GTGTCCTGCG GTGTCACGCA GTGCCAGGAA ACGCTGCGCA CCGCGATGGC GATCGGCGCC
GACCGCGCCA TCCTGGTCGA GACTTCTGAT GAGTTGCAGC CGTTGGCTGT GGCCAAGCTC
TTGAAGGCCT TGGTCGACCG CGAACAGCCC GGCCTGATCA TCCTGGGCAA GCAGGCCATC
GACGACGACA ACAACCAGAC CGGCCAGATG CTGGCGGCAT TGGCTGACCT GCCGCAAGCC
ACGTTCGCCA GCAAGGTTGA AGTGATCGAT GGCCGTGCCA ACGTGACGCG TGAAATCGAC
GGTGGCCTGG AGACGATCTC GCTCAGCCTA CCCGCGGTCA TCACCACAGA CCTGCGCCTG
AACGAGCCGC GTTACGTCAC GCTGCCCAAC ATCATGAAGG CCAAGAAGAA GCCGCTGGAG
ACGATCAAGC CGGCCGACCT GGGTGTCGAC GTGAGCCCGC GCCTGAAGAC GCTGAAAGTC
AGCGAGCCGC CTAAGCGTGG CGCCGGCATC AAGGTGCCCG ACGTCGCCAC ACTGGTGGCC
AAACTCAAGA ACGAAGCCAA GGTGATCTGA
 
Protein sequence
MKALVSVKRV VDYNVKVRVK SDGTGVDIAN VKMSMNPFDE IAIEEAVRLR EKGVLTEVIA 
VSCGVTQCQE TLRTAMAIGA DRAILVETSD ELQPLAVAKL LKALVDREQP GLIILGKQAI
DDDNNQTGQM LAALADLPQA TFASKVEVID GRANVTREID GGLETISLSL PAVITTDLRL
NEPRYVTLPN IMKAKKKPLE TIKPADLGVD VSPRLKTLKV SEPPKRGAGI KVPDVATLVA
KLKNEAKVI