| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3568 |
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| Symbol | |
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| ID | 6160998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3985333 |
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| End bp | 3987381 |
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| Gene Length | 2049 bp |
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| Protein Length | 682 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641666341 |
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| Product | bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase |
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| Protein accession | YP_001792587 |
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| Protein GI | 171060238 |
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| COG category | [C] Energy production and conversion
[I] Lipid transport and metabolism |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases
[COG2030] Acyl dehydratase |
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| TIGRFAM ID | [TIGR02278] phenylacetic acid degradation protein paaN |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.282162 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCCTT CCGTTTTGCA GAGCCACATC GGTGGCCGCT GGATCGGCAC GCAAGCCGCA
CAGACGCTGC GCAGCGCGAT CAACGGCCAG CCCGTGGCCG CCACCCACGC CGACGCGATC
GACTTCGGCG AGGCCGTGGC CTACGCGCGC CGCACCGGCT TGCCCGGCCT GCTGGCGCTG
GATTTCCAGC AGCGCGCGCA ACGCCTGAAG GCGCTGGCCA AGTACCTCAA CGAACACAAG
GAGCAGCTGT ACGCAGTCTC GGCCCACACC GGCGCGACGC GCACCGACAG CTGGATCGAC
ATCGAGGGCG GCACCGGCAC GCTGTTCGCC TACGCCAGTG CCGGCAGCAA CGAGCTGCCC
AGCGGCAACC TGCTGCACGA AGGCCCGGTG CTGAACCTGA GCAAGAAGGG CGGCTTCGCG
GCCACGCACA TCCTGGTGCC ACGCGGCGGC CTGGCGGTGC ACATCAATGC GTTCAACTTT
CCGATCTGGG GCCTGCTGGA GAAGTTCGCG CCGAGCTTCC TGGCCGGCAT GCCGTGCATC
GGCAAACCGG CGACGGCCAC GAGTTATCTG ACCGAAGCGC TGGTGCGCCT GATCGACGCC
AGCGGCCTGC TGCCCGCGGG CGCCTTGCAG CTGGTGATCG GCGGCACGGG CGATCTGCTG
GATCGGCTCG ACGGCAGCGA TGTCGTCACC TTCACCGGCT CGGCCGACAC CGCCGCCAAG
CTGCGTGTGC ACCCGAACAT CGTGCGCCAC TCGATCCCGT TCAACGCCGA GGCCGACTCG
CTCAACTGCG CGATCCTGGC GCCCGATGTG TCGCCCGACG ACGAGGAGTT CGAGCTCTTC
GTCAAGGAGG TGGCGCGCGA GATGACCGTC AAGGCCGGCC AGAAATGCAC CGCGATCCGC
CGCGCCATCG TGCCGCGCCA GCATCTCGAT GCGGTGGCCG AGAAGCTGCG TGCGCGGCTG
GCGAAGACGA CGGTGGGTGA TCCGTCGCTC GAAGGCGTGC GCATGGGGCC GCTGGCCTCG
CACGCGCAGC AGGCCGACGT GGCCGAGCGG GTCGCGCTGC TGCTGCAGGG CTGCGAACAG
GTCTACGGCG CGAAAGATGG CGCCGCGCCG CAAGGCACGG GCGTGGCCGA GGGTGCGTTC
TTCTCGCCCA CGCTGCTGCT CAGCCGCCAG CCGCTGCAGC ACGACGCGGT GCACGACGTC
GAAGCGTTCG GGCCGGTCAG CACGCTGATG GCGTACGACG GCATCGACGA AGCGCTGGCG
CTCGCCGCCC GTGGCCGCGG CAGCCTGGTC GGCACGCTGG TGACGAAAAG CCCGGCCATT
GCCGCGCGCG TGATCCCGGT CGCCGCCGCA TTGCACGGCC GCCTGCTGGT GCTCGACCGC
GAAGCTGCCG TCGAATCGAC CGGCCACGGC TCACCGCTGC CGATGCTCAA GCACGGCGGC
CCGGGCCGAG CCGGTGGCGG CGAAGAACTC GGCGGCATGC GCGCCGTCAA GCACTACCTG
CAGCGCACCG CCGTGCAGGG CTCGCCGACG ATGCTCGCCG CCATCACCGG CGAACATGTG
CGCGGCGCCC AGGTGATCGA GACCGAGGTT CATCCGTTCC GCCGTCACTT CGAGGAGCTG
CAGATCGGCG AGAGCCTGCT GACGCACCGC CGCACCGTCA CCGAGGCCGA CCTCGTCAAC
TTCGGCGGCA TCTCGGGCGA CTACTTCTAC ATGCACTTCG ACGCCATCGC GGCCAAGGAC
ACGCAGTTCG GCCAGCGCAT CGCGCACGGC TACTTCGTGC TGTCGGCCGC GGCGGGGCTG
TTCGTCAGCC CGGCCCCCGG CCCCGTGCTG GCCAACTACG GCCTCGACGC GCTGCGCTTC
GTCAAGCCGG TGGCGATCGG CGACACCATC CAGGCGCGGC TCACTGCCAA GCGCAAGATC
GACCGCAACC GCGTCGATGC CAAGGGTGTG GGGCAGGGCG TGGTGGCGTG GGACGTCGAG
GTCACCAACC AGCTCGGCGA ACTGGTGGCG AGCTACGACA TCCTGACGCT GGTGGCCAAG
CGCGGCTGA
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| Protein sequence | MHPSVLQSHI GGRWIGTQAA QTLRSAINGQ PVAATHADAI DFGEAVAYAR RTGLPGLLAL
DFQQRAQRLK ALAKYLNEHK EQLYAVSAHT GATRTDSWID IEGGTGTLFA YASAGSNELP
SGNLLHEGPV LNLSKKGGFA ATHILVPRGG LAVHINAFNF PIWGLLEKFA PSFLAGMPCI
GKPATATSYL TEALVRLIDA SGLLPAGALQ LVIGGTGDLL DRLDGSDVVT FTGSADTAAK
LRVHPNIVRH SIPFNAEADS LNCAILAPDV SPDDEEFELF VKEVAREMTV KAGQKCTAIR
RAIVPRQHLD AVAEKLRARL AKTTVGDPSL EGVRMGPLAS HAQQADVAER VALLLQGCEQ
VYGAKDGAAP QGTGVAEGAF FSPTLLLSRQ PLQHDAVHDV EAFGPVSTLM AYDGIDEALA
LAARGRGSLV GTLVTKSPAI AARVIPVAAA LHGRLLVLDR EAAVESTGHG SPLPMLKHGG
PGRAGGGEEL GGMRAVKHYL QRTAVQGSPT MLAAITGEHV RGAQVIETEV HPFRRHFEEL
QIGESLLTHR RTVTEADLVN FGGISGDYFY MHFDAIAAKD TQFGQRIAHG YFVLSAAAGL
FVSPAPGPVL ANYGLDALRF VKPVAIGDTI QARLTAKRKI DRNRVDAKGV GQGVVAWDVE
VTNQLGELVA SYDILTLVAK RG
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