Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3537 |
Symbol | |
ID | 6161277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 3954826 |
End bp | 3955278 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641666310 |
Product | cytochrome c prime |
Protein accession | YP_001792556 |
Protein GI | 171060207 |
COG category | [C] Energy production and conversion |
COG ID | [COG3909] Cytochrome c556 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0147332 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGTT TCACCCTTGC ACTGAGCGCA ACTGTTGGCC TGTTCCTGGC CCTGCCCGCG GCAGCCCAGT TCCAGAAGCC CGAAGATGCG ATCAAGTATC GCAAGTCGGC CTTCACCGTC ATGGGATCCC ACTTCGGCCG CATCGGTGCG GTCGTTCAGG GCAAGGCCCC GTTCGACGCC AAGACCGTGG CCGACAACGC CCAGATCGTG GCCACGATGT CGATGCTGCC GTTCGCCGGT TTCGTGCCGG GCAGCGACAA GGGCGACACC CGCGCCAAGC CGGAAGTCTG GACCGAGATG GACAAGGTCA AGGCCGGCGC CACCAAGATG CAGGAAGCCA TCACCGCCCT GAACGCGGCG GCCAAGACCG GCAACCTCGA CCAGATCAAG GTCGCGTTCG GCGAAGCCGG CAAGACCTGC AAAGGCTGCC ACGACAACTA CCGCAAGGAC TGA
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Protein sequence | MKRFTLALSA TVGLFLALPA AAQFQKPEDA IKYRKSAFTV MGSHFGRIGA VVQGKAPFDA KTVADNAQIV ATMSMLPFAG FVPGSDKGDT RAKPEVWTEM DKVKAGATKM QEAITALNAA AKTGNLDQIK VAFGEAGKTC KGCHDNYRKD
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