| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3534 |
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| Symbol | |
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| ID | 6161274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3952363 |
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| End bp | 3953262 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641666307 |
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| Product | SMP-30/gluconolaconase/LRE domain-containing protein |
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| Protein accession | YP_001792553 |
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| Protein GI | 171060204 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3386] Gluconolactonase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0305763 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTCG ACCTGATCTA CGCCGTCAGT GCCCCGATGC TGCTCGGCGA GTCCCCCATG
TGGCACCCGC AGGAGCAGTT GCTGTACTGG GTCGACATCC CCGGCAAGCG CCTGCATCGG
CTCGATCCGG GCAGCGGTGC CCAGCGCCAC TGGGATTTCC CGTGCGAGCC GGCGGCCTGC
GCGCCGGTGC TGGGTGGCGG CCTGCTGCTG GCCATGCGCG ACGGCCTGTG GCGCTTCGAC
CCCGAAACCT CGTTGCGCAG CCTGCTGTGC GAGCCGCCCT ACGACCCGTC GAGCGAACGC
TTCAACGACG GCAAGTGCGA TCCGCTGGGG CGCTTCTGGG TCGGCACCAT CTACGAGCCG
CGCGAGCCCG CGCGAGCCGC GCTGTACCGC TGGCACGCAC GCAAGCTCGA TCGCATGGCC
GGAGACATCA CGGTCTCGAA CGGCCTGGGC TGGAGCCCCG ATGCCCGCAC GATGTACTGG
TCCGACACCA AGGCTCACAC GGTCTACGCC TTGGACTTCG ATGTCGGTGA GGGCGCCGTG
TCGCAGCAGC GCGTGTTTGC CAGCTTCGAG CGCAAGCGGC CGGATCAGGA TCTGCGCCAT
TACGGCGGCC GCCCGGACGG CGCGGCGGTC GATGCGCAGG GCTGCTACTG GGTGGCGATG
TTCGAGGGCC AGCGTCTGCT GCGTCTGTCG CCGCAAGGCA CGGTGCTGCG CGAGCTGGCC
TTGCCGGTGC GCTGTCCGAC CATGCCGTGT TTCGGTGGGG CGGACCTGCG CACCCTGTAC
ATCACGACCG CGCGCGAGAA CCGGCCCGCC CCAGAACTGG CCGAACAGCC GCTGGCGGGC
TGTGTGCTCT CATTGCGGGT CGACGTGCCT GGCCTGCCGG TGAACTACGC GAGGCTTTGA
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| Protein sequence | MSLDLIYAVS APMLLGESPM WHPQEQLLYW VDIPGKRLHR LDPGSGAQRH WDFPCEPAAC
APVLGGGLLL AMRDGLWRFD PETSLRSLLC EPPYDPSSER FNDGKCDPLG RFWVGTIYEP
REPARAALYR WHARKLDRMA GDITVSNGLG WSPDARTMYW SDTKAHTVYA LDFDVGEGAV
SQQRVFASFE RKRPDQDLRH YGGRPDGAAV DAQGCYWVAM FEGQRLLRLS PQGTVLRELA
LPVRCPTMPC FGGADLRTLY ITTARENRPA PELAEQPLAG CVLSLRVDVP GLPVNYARL
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