Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3527 |
Symbol | |
ID | 6161806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 3946776 |
End bp | 3947657 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641666300 |
Product | ATP synthase F1, gamma subunit |
Protein accession | YP_001792546 |
Protein GI | 171060197 |
COG category | [C] Energy production and conversion |
COG ID | [COG0224] F0F1-type ATP synthase, gamma subunit |
TIGRFAM ID | [TIGR01146] ATP synthase, F1 gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0286312 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGCAG GCAAGGAAAT ACGCGGCAAG ATCAAGTCGG TGGAGAACAC CAAGAAGATC ACCAAGGCCA TGGAAATGGT CGCTGCGTCC AAGATGCGCA AGGCGCAGGA ACGCATGCGG GCGGCTCGTC CGTATGCCGA CAAGATCCGC AACATCACGG CCAACCTGTC GCGGGCGACG CCCGAGTACC ACCATCCGTT CGTGGTCAAG AACAGCGGCA GCGGTGTGGT GGGCATGATC ATCGTCACGA CCGACAAGGG TCTGTGCGGT GGCATGAACA CCAACGTGCT GCGGCTCGTG ACCAACAAGA TGCGCGAACT CGACGCCGCC GGCACCAAGG TGCAGGCGGT CGCGATCGGC AACAAGGGTC TCGGTTTCCT GAACCGCATC GGCGCAAAGG TGGTCTCGCA GGCCACCCAG CTCGGTGACA CGCCGCATCT GGACAAGCTG ATCGGCCCGG TCAAGGTGCT GCTCGACCTC TACGCCGAAG GCAAGCTCGA CGCGGTCTAC ATCTGCTACA CCCGCTTCCT CAACACGATG AAGCAGGAGC CGCAGGTGGA GCAACTGCTG CCCTTGTCGG ATGAACGGCT GTCGCAGTCG GCCGCCGAGC AGCAGTCGCA CGGCTGGGAC TACATCTACG AACCCGACGC GCAAGCGGTG ATCGACAACC TGATGGTGCG TTACGCGGAA GCGCTGATCT ACCAGTCGGT CGCCGAGAAC ATGGCCTCCG AGCAGTCCGC GCGCATGGTG GCGATGAAGG CCGCAACCGA CAACGCCGGC AGCCTGATCG GCGAGCTCAA GCTGGTCTAC AACAAGACCC GCCAGGCCGC GATCACGAAG GAACTGTCGG AAATCGTCAG CGGCGCCGCC GCTGTGGGTT GA
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Protein sequence | MAAGKEIRGK IKSVENTKKI TKAMEMVAAS KMRKAQERMR AARPYADKIR NITANLSRAT PEYHHPFVVK NSGSGVVGMI IVTTDKGLCG GMNTNVLRLV TNKMRELDAA GTKVQAVAIG NKGLGFLNRI GAKVVSQATQ LGDTPHLDKL IGPVKVLLDL YAEGKLDAVY ICYTRFLNTM KQEPQVEQLL PLSDERLSQS AAEQQSHGWD YIYEPDAQAV IDNLMVRYAE ALIYQSVAEN MASEQSARMV AMKAATDNAG SLIGELKLVY NKTRQAAITK ELSEIVSGAA AVG
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