| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3526 |
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| Symbol | |
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| ID | 6161805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3945218 |
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| End bp | 3946642 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641666299 |
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| Product | F0F1 ATP synthase subunit beta |
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| Protein accession | YP_001792545 |
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| Protein GI | 171060196 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
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| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0209183 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAACA TTCAAGCCAC CGCTGGTGCG GTCGGCAAGA TCGTTCAGTG CATCGGCGCC
GTGGTGGACG TGGAATTTCC GCGCAACCAG ATGCCGCGCA TCTATGACGC GCTGAAGCTC
GAAGGCACCG CACTGACGCT GGAAGTCCAG CAGCAGCTCG GCGACGGCGT GGTCCGCACC
ATTGCGCTGG GCTCGTCCGA CGGCCTGCGC CGCGGTCTGG AAGTCAAGAA CACCGGCCTG
CCGATCACCG TGCCCGTCGG CCCGGCGACG CTGGGTCGCA TCATGGACGT GCTGGGCAAC
CCGATCGACG AGCGCGGTCC GGTCAGCATG GAGCTGTCGG CCTCGATCCA CCGCAAGGCA
CCGGCCTATG ACGAGCTGAG CCCGTCGCAG GACCTGCTGG AAACCGGCAT CAAGGTGATC
GACCTGATCT GCCCGTTCGC CAAGGGCGGC AAGGTGGGTC TGTTCGGTGG CGCCGGCGTC
GGCAAGACCG TGAACATGAT GGAACTCATC AACAACATCG CCAAGGCTCA CTCGGGTCTG
TCGGTGTTCG CGGGTGTGGG CGAGCGGACC CGTGAGGGCA ACGACTTCTA TCACGAGATG
GCCGATTCGG GCGTCGTCAA CCTCGAGAGC CTGGGCGAGT CCAAGGTCGC GATGGTCTAC
GGCCAGATGA ACGAGCCCCC GGGCAACCGT CTGCGCGTCG CGCTGACCGG CCTGACGATC
GCCGAGTCGT TCCGCGACGA AGGCCGTGAC GTGCTGTTCT TCGTCGACAA CATCTACCGC
TACACGCTGG CCGGTACCGA AGTGTCGGCA CTGCTCGGCC GCATGCCGTC GGCCGTGGGC
TATCAGCCGA CGCTGGCCGA GGAAATGGGC CGCCTGCAAG AGCGCATCAC GTCGACCAAG
GTCGGCTCGA TCACCTCGAT CCAGGCCGTC TACGTCCCTG CGGACGACCT GACCGACCCG
TCGCCTGCCA CCACCTTCGC CCACCTGGAC GCCACGGTCG TGCTGTCGCG TGACATCGCT
TCGCTGGGCA TCTACCCCGC GGTCGATCCG CTCGACTCGA ACAGCCGCCA GGTCGACCCG
AACGTCGTCG GTGAAGAGCA CTACAACACC ACCCGTGCCG TGCAGCAGGT TCTGCAGCGC
TACAAGGAAC TGCGCGACAT CATCGCCATC CTGGGCATGG ACGAGCTCGC TCCGGAAGAC
AAGCTGGCCG TGTCGCGCGC TCGCAAGATC CAGCGCTTCC TGTCGCAGCC CTTCCACGTC
GCCGAAGTGT TCACCGGCTC GCCGGGCAAG TACGTGCCGC TGAAGGAAAC CATCCGCGGT
TTCAAGATGA TCGTGGCCGG CGAGTGCGAT CACCTGCCCG AGCAGGCGTT CTACATGGTC
GGCACCATCG ACGAAGCCTT CGAAAAAGCG AAGAAGATGC AGTAA
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| Protein sequence | MANIQATAGA VGKIVQCIGA VVDVEFPRNQ MPRIYDALKL EGTALTLEVQ QQLGDGVVRT
IALGSSDGLR RGLEVKNTGL PITVPVGPAT LGRIMDVLGN PIDERGPVSM ELSASIHRKA
PAYDELSPSQ DLLETGIKVI DLICPFAKGG KVGLFGGAGV GKTVNMMELI NNIAKAHSGL
SVFAGVGERT REGNDFYHEM ADSGVVNLES LGESKVAMVY GQMNEPPGNR LRVALTGLTI
AESFRDEGRD VLFFVDNIYR YTLAGTEVSA LLGRMPSAVG YQPTLAEEMG RLQERITSTK
VGSITSIQAV YVPADDLTDP SPATTFAHLD ATVVLSRDIA SLGIYPAVDP LDSNSRQVDP
NVVGEEHYNT TRAVQQVLQR YKELRDIIAI LGMDELAPED KLAVSRARKI QRFLSQPFHV
AEVFTGSPGK YVPLKETIRG FKMIVAGECD HLPEQAFYMV GTIDEAFEKA KKMQ
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