| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3499 |
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| Symbol | |
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| ID | 6159983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3912631 |
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| End bp | 3913257 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641666272 |
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| Product | 50S ribosomal protein L25/general stress protein Ctc |
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| Protein accession | YP_001792518 |
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| Protein GI | 171060169 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
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| TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00000000491159 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAATTCG TCGCATTCGC TCGTGAGCTG CAGGGGACCG GAGCGAGCCG CCGCCTGCGC
CACGGCGGCA AGGTGCCGGG CATCGTCTAC GGTGGCTCGG GCAAGCCGAC CTCGATCGAA
CTCGATCACA ACGCGCTGTA CCACGCGCTG AAGAAGGAAG CCTTCCACTC GTCCATCCTC
GAGATGGAAC TGGCCGGCCA GTCCGAAAAG GTCGTGCTGC GCGCCCTGCA GATGCACGCA
TTCAAGCAAC TGGTGCTGCA CGTGGACTTC CAGCGCGTGG ACGAAACCAC CCGCATCAAG
AAGAAGGTGC CGCTGCACTT CGTCAACGAA GCCGAGTCGC AGGCCGTCAA GCTCGACAAG
TGCCTGATCA ATCACGTGGT CAGCGAACTT GAGATCGAGT GCCTGGCCGA GAAGCTGCCC
GAGTTCCTGA CCGTCGACCT CGGCGGCCTG AGCAAGGGTC AGTCGCTGCA CGTCGACGAC
CTCAAGCTCG AAGCCAGCAT CAAGGTCGTG ACCCACGGCC GCAAGAACCC GGTCGTCGCG
ACCGTGGTGC CGATCGTCGA AGAAGAAGTG ATCGTTGCCG CACCGGTCGA AGCACCTGCC
AAGGGCAAGG GCAAGGGCAA GAAATAA
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| Protein sequence | MKFVAFAREL QGTGASRRLR HGGKVPGIVY GGSGKPTSIE LDHNALYHAL KKEAFHSSIL
EMELAGQSEK VVLRALQMHA FKQLVLHVDF QRVDETTRIK KKVPLHFVNE AESQAVKLDK
CLINHVVSEL EIECLAEKLP EFLTVDLGGL SKGQSLHVDD LKLEASIKVV THGRKNPVVA
TVVPIVEEEV IVAAPVEAPA KGKGKGKK
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