Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3492 |
Symbol | |
ID | 6160007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 3903716 |
End bp | 3904870 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641666264 |
Product | A/G-specific adenine glycosylase |
Protein accession | YP_001792511 |
Protein GI | 171060162 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1194] A/G-specific DNA glycosylase |
TIGRFAM ID | [TIGR01084] A/G-specific adenine glycosylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0000130303 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | TTGAGCCGCG CCGCCACGGC CGAGCTGCCA TCCATCGCCG CCGATCTGGT GCGCTGGCAG CGCCAGCACG GCCGCCACGG CCTGCCCTGG CAGGCCAGCC GCGACCCGTA TCGCGTCTGG CTGTCCGAGG TCATGCTGCA GCAGACCCAG GTTGCCACCG TGCTCGGTTA CTACGAGCGC TTCCTGCAGC GCTTTCCCGA CATCGCCGCG CTCGCCGCCG CGCCGCTCGA CGACGTGCTG GCGCTGTGGA GCGGCCTGGG CTACTACAGC CGCGCGCGCA ACCTGCACCG TTGCGCGCAG GTGGTGGTGG CCGAACACGG CGCTGCGCTG CCGCGCCGTG CCGAGCAGCT GGTCGAGCTG CCGGGCATCG GCCCCTCGAC CGCCGCCGCC ATCGCCTCGT TCTGCCACGG CGAGCGGGTC TCGATCTTCG ACGGCAACGT CAAGCGCGTG CTCGCGCGGC TGCTGGCGTT CGAGGGCGAC CTGGCCCAGG CGGGCGCGGC CAAGGTGCTG TGGGCGCAGG CCGACCGGCT GGTGCCGACC GACGCCGCCG ACATGCCGGC CTACACCCAG GGCCTGATGG ACCTGGGCGC CACGGTCTGC ACGCCGCGCG ATCCGCAATG CCCCGCCTGC CCGCTGCAGC GCGCCTGCCG CGCGCATGCC GCCGGGTCGG TCCTGACCTA TCCGATCAAG TCGCGCAAGC TCAAGCGCAG CCGGCGCGAG AACTGGTGCC TGTGGCTCAG CCTGGGCGAC GCGGTCTGGC TGCAGCAGCG TCCCGACACC GGCATCTGGG CGGGGCTCTG GGCCTGGCCC TTGTTCGACG ACACCGACGC GGTCGAGCGC CTGACGGCGC AGCTGCTCGC CGCCCTCGGC GGCCATGCCG AGCGGCTGCA GGCGAACCGC CTGCCCGGCT TCGTGCACGT GCTCACGCAC CTCGACTGGA CGCTGCACCC CTGCCGCCTG CACCTGCCGG CGCCGGTGGT GCTGCAAGCC CGTGAGCCCG GCGGGGGTGA CGGGGAACGC GGTGACGGCC CGCTCGAGCG CCTCGATGCC GTGCTGAATC AGCAGCTCGG TGCCGGCCGC TGGCACGCTG CAGCCGATCT GCACCGGCTC GGACTGCCGG CGCCGCTGCG CAAGGTGCTG CTCGATATCA CCTGA
|
Protein sequence | MSRAATAELP SIAADLVRWQ RQHGRHGLPW QASRDPYRVW LSEVMLQQTQ VATVLGYYER FLQRFPDIAA LAAAPLDDVL ALWSGLGYYS RARNLHRCAQ VVVAEHGAAL PRRAEQLVEL PGIGPSTAAA IASFCHGERV SIFDGNVKRV LARLLAFEGD LAQAGAAKVL WAQADRLVPT DAADMPAYTQ GLMDLGATVC TPRDPQCPAC PLQRACRAHA AGSVLTYPIK SRKLKRSRRE NWCLWLSLGD AVWLQQRPDT GIWAGLWAWP LFDDTDAVER LTAQLLAALG GHAERLQANR LPGFVHVLTH LDWTLHPCRL HLPAPVVLQA REPGGGDGER GDGPLERLDA VLNQQLGAGR WHAAADLHRL GLPAPLRKVL LDIT
|
| |