Gene Lcho_3491 details

Gene Information

• Locus tag: Lcho_3491
• ID: 6160006
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 3903070
• End bp: 3903699
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 641666263
• Product: peptidase S16 lon domain-containing protein
• Protein accession: YP_001792510
• Protein GI: 171060161
• COG category: [R] General function prediction only
• COG ID: [COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.00000806385
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGACACCCG ACCCGGCGGT GCTGCACGAT CTGCCGCTGT TTCCGCTCGG CACGGTGCTG 
TTCCCGCGCG GCGTGCTGGC GCTGAAGGTG TTCGAGGTGC GCTACCTCGA CCTCATCAGC 
ACCTGCCTGC GCGAGGGTTC GCCGTTCGGC GTCGTCACGC TGATGCAGGG CGGCGAAGTG 
CGCCGCCCCG GCGACAGCGT CAAGTTCGAG CGCGTCGGCT GCCTGGCCAC GCTGCAGAGC 
TGCGACAGCG ACCAGCCCGG CATCCTGCAG GTGCGCTGCA TCGGCGGGCG CCGCTTCGAG 
CCCGAGCAGA CGCTGCAGCG CGCCGACGGG CTCTGGCTGG CCGGCCACGC CACCTTGCTG 
GCCGACGACA TCACGCAGGC GCCGCGACCC GAATCCCACG GCGCCGTGCT GGCGCTCGGG 
CGTGCGGTGG CGGCGCTCGA CCAGCGCGGC CAGCACCCGT TCCAGGCGCC CTACTGCTAC 
GACGACGCCG GCTGGGTCGC CAACCGCTGG TGCGAGATCC TGCCGATCCC GCTGGCCACG 
CGCCACAAGC TGATGGCCCT GCCCGACCCG CACGCCCGGC TGCAGCTGGT CAACGACTTC 
CTGTGCCGTC ACGGCATCGT CGACGCCTGA 

 

Protein sequence

MTPDPAVLHD LPLFPLGTVL FPRGVLALKV FEVRYLDLIS TCLREGSPFG VVTLMQGGEV 
RRPGDSVKFE RVGCLATLQS CDSDQPGILQ VRCIGGRRFE PEQTLQRADG LWLAGHATLL 
ADDITQAPRP ESHGAVLALG RAVAALDQRG QHPFQAPYCY DDAGWVANRW CEILPIPLAT 
RHKLMALPDP HARLQLVNDF LCRHGIVDA