| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3469 |
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| Symbol | |
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| ID | 6159786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3882930 |
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| End bp | 3884231 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641666243 |
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| Product | integrase family protein |
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| Protein accession | YP_001792490 |
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| Protein GI | 171060141 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0423889 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCGA CGAACAACCT CGACGACAAG AGCATCCGTG CCGCGATCAA GCGGGCGATG
AAGGCGCAGG CCGGCGAGCG GCTGACCGAT GGCGATGGCT TGCGCCTGGA CGTGCAGCCG
ACCGGTTCTG CCTGGTGGCG CTGGCGCTAC CGCTTCGGCG GGAAGGAGGG GATGCTGTCT
CTCGGCACCT ACCCCGACAC GTCCCTGTCG GCAGCTCGCG GCAGGCGCGA CGAGGCGCGC
GAGCGGCTGG CAGCCGGGAT CAACCCGAGC GAGGCGCGCA AGGATGACAA GGCGGCCCAG
GCGCTGAAGG CTGAGGCTGC CCGCCTGGCC GCAGCGGGAT TGCCCGGGCC TGGCACGTTC
GAGCACGCGG CCCGGGAGTG GCATGCCCGC ATGGCGCCGA GCTGGTCGGA AGGGCACGCT
GGCAAGGTGC TGGCGCTACT GGTGAATGAC CTGTTCCCCT TCATCGGCAC GAGTGCGCTT
GCCGAGCTGA CCCCGCCCGA GCTGTTGAAG CACGCTCGGC GCATCGAGGC CCGCGGTGCG
GTCGAAACCG CATACCGGGC CCTGAAGGCG GCTGGCGCCG TGTTCCGCCA CGGCGTGCAG
AACGGCTACT GCGACAGCGA CCCCACGCGA GACCTGAAGG GCGCCATCGT GCTGCCCGTA
CCGGAGCATC GGGCTGCCAT CACCGACCCA GCCAGGTTGG GCGAACTGCT GCGGGCCATC
GACGGATACC AAGGCACGCC GGTTGTACGC TCCGCTCTCG CGCTGGCGCC GCTGGTTTTC
CTGCGACCGG GTGAGCTGCG CAAGGCCGAG TGGGCAGAGT TCGACCTCGA CGCAGCCGTG
TGGACCATCC CGGCTGCGCG CATGAAGGGG CGGTTGAAAG CCAAGCTCAA CGGCCCCGAT
CATGTGGTGC CGCTGGCGCC ACAGGCGGCG GCAATCCTGC GCGACCTGCA ACCGCTGACG
GGTGCCGGCA AGTACGTGTT CCCGAATCCG CTCACGCCCG ACCGTCCGCT ATCCGACAAC
GGTGTGCTGT CAGCGCTGCG CCGGATGGGC TTCGACAAGG ACGAGATGAC GGGCCACGGA
TTCCGTGCCA CGGCGCGGAC CATCGCGGCC GAGCGGCTGA AGATCGACCC CGTGGTGCTC
GAAGCGCAGC TTGCGCACGT AGTGGCCGAT GCGCTGGGCC GGGCCTACAA CCGTACGCAG
TACCTCGACC AGCGCCGCGA CATGATGACC CGCTGGGCCG ACTACCTGGA CCGCCTGCGC
AAGGGCGCAG AGGTGGTCGA CCTGACAAGC AAGCGGGCCT GA
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| Protein sequence | MAATNNLDDK SIRAAIKRAM KAQAGERLTD GDGLRLDVQP TGSAWWRWRY RFGGKEGMLS
LGTYPDTSLS AARGRRDEAR ERLAAGINPS EARKDDKAAQ ALKAEAARLA AAGLPGPGTF
EHAAREWHAR MAPSWSEGHA GKVLALLVND LFPFIGTSAL AELTPPELLK HARRIEARGA
VETAYRALKA AGAVFRHGVQ NGYCDSDPTR DLKGAIVLPV PEHRAAITDP ARLGELLRAI
DGYQGTPVVR SALALAPLVF LRPGELRKAE WAEFDLDAAV WTIPAARMKG RLKAKLNGPD
HVVPLAPQAA AILRDLQPLT GAGKYVFPNP LTPDRPLSDN GVLSALRRMG FDKDEMTGHG
FRATARTIAA ERLKIDPVVL EAQLAHVVAD ALGRAYNRTQ YLDQRRDMMT RWADYLDRLR
KGAEVVDLTS KRA
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