| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3458 |
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| Symbol | |
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| ID | 6159893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3860725 |
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| End bp | 3862029 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641666233 |
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| Product | guanine deaminase |
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| Protein accession | YP_001792481 |
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| Protein GI | 171060132 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | [TIGR02967] guanine deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.164027 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAC CCGTTCGTCA AGCCCTGTTC GGCGACCTGC TCGACTTCAC CGCCGACCCC
GGCTGGGCCG CGCCGGCCGA TGCGCTGCCC GCCGTGCGCT GGCGGCCCGA TCACTGGCTG
CTGATCGAGG ACGGCCGCAT CGTCGCCGCC CAGCCGCAGG CGCCGGGCGA CGACTGGCAG
CGCCACGATC ACGCCGGCCG GCTGATCCTG CCGGGTTTCA TCGACACCCA CGTGCACAGC
CCGCAGCTCG ACGTCATCGC CAGCTACGGC ACCGAGCTGC TCGACTGGCT GGAGCGCTAC
ACCTTTCCGG CCGAGCGCCG CTACGCCGAC CCGGCCGTGG CACACGCCGG CGCGCAGACG
TTTCTCGACG CCTTGCTCGC GCACGGCACG ACCTCGGCGG TGGTGTTCCC GACCGTGCAC
GCGGTCTCGG CCGATGCGCT GCTGGCCGGC GCCCATGCCC GCGGCATGCG GCTGATCGCC
GGCAAGGTGC TGATGGACCG TCATTGCCCC GACGGCCTGC GTGACGACGT GGCCAGCGCC
GACGCCGACA GCCGCACGCT GATCGAACGC TGGCACGGCA CCGGCCGCCT GTCCTACGCG
ATGACGGTGC GCTTCGCACC CACCAGCACG CCCGAACAGC TCGCGATGGC CGGGCGTTGG
ATGGCCGAGG TGCCCGGCCT CTACATGCAG ACCCACGTGG CCGAGAACCG CACCGAGGTG
GCGTGGGTGG CCCAGCTGTT CCCCGAGGCG CGCAGCTACC TCGACGTCTA CCACCGCGCC
GGCCTGCTCA ACGGACGCGC CGTGCTGGCA CACGGCATCT GGCTCGACGA CACCGACCGC
GCGCTGCTGG CCGATACCGG CGCGCAGATC GCCCACAGCC CGAGCAGCAA CCTGTTCCTG
GGCAGCGGCC TGTTCGGCTG GCAGGCTCTT GAGGCGGCCG GCGCGCACGT CAGCATGGCC
AGCGACGTGG GTGGCGGCAC CAGCCTGTCG ATGCAGCGCA CGCTCGCCGA TGCCTACAAG
ATCCAGGCGC TGCAGGGCGT GCGGCTGACG GCCTTCAAGG CGCTGCATGC GGCCACCCGC
GGCGGCGCCG AAGCGCTCGG CCTGGCGCAC GAGATCGGCT CGTTCGATGC CGGCTGCAGC
GCCGACCTGT GCGTGTGGGA CTGGTCGCAC GGCGCCGTGG CCCGGCACCG CGACGCCTTG
GCGCAGGATT TGCACGAACG CCTGTTTGCC TGGCTGGTGC TGGGCGACGA ACGCAACCTG
CGCGCCACCT GGGTGGCCGG GCAGCCCCGC CATCAACGCG ATTGA
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| Protein sequence | MSAPVRQALF GDLLDFTADP GWAAPADALP AVRWRPDHWL LIEDGRIVAA QPQAPGDDWQ
RHDHAGRLIL PGFIDTHVHS PQLDVIASYG TELLDWLERY TFPAERRYAD PAVAHAGAQT
FLDALLAHGT TSAVVFPTVH AVSADALLAG AHARGMRLIA GKVLMDRHCP DGLRDDVASA
DADSRTLIER WHGTGRLSYA MTVRFAPTST PEQLAMAGRW MAEVPGLYMQ THVAENRTEV
AWVAQLFPEA RSYLDVYHRA GLLNGRAVLA HGIWLDDTDR ALLADTGAQI AHSPSSNLFL
GSGLFGWQAL EAAGAHVSMA SDVGGGTSLS MQRTLADAYK IQALQGVRLT AFKALHAATR
GGAEALGLAH EIGSFDAGCS ADLCVWDWSH GAVARHRDAL AQDLHERLFA WLVLGDERNL
RATWVAGQPR HQRD
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