| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3451 |
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| Symbol | rpsI |
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| ID | 6159868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3853814 |
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| End bp | 3854206 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641666226 |
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| Product | 30S ribosomal protein S9 |
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| Protein accession | YP_001792474 |
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| Protein GI | 171060125 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0103] Ribosomal protein S9 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0078135 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGATCGGTG AATGGAACTA TGGCACGGGC CGTCGCAAGT CGTCGGTCGC ACGTGTGTTC
ATCAAGAAGG GCACGGGCAA GATCATCGTG AACGGCAAGA CGGTCGAAGA GTACTTCGGT
CGTCAAACCT CGATCATGAT CTGCAAGCAA CCGCTGTTCC TGACGAACAA CGCTGAAGCG
TTCGACATCA AGGTCAACGT GCACGGTGGC GGCGAGTCGG GCCAGGCCGG CGCAGTGCGC
CACGGCGTGA CGCGCGCGCT GATCGACTAC GACGCAGCGC TCAAGCCCGA ACTGAGCAAC
GCCGGCTTCG TGACGCGTGA CGCGCGCGAA GTCGAGCGCA AGAAGGTCGG TCTGCACGGC
GCTCGCCGTC GCAAGCAGTT CAGCAAGCGC TGA
|
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| Protein sequence | MIGEWNYGTG RRKSSVARVF IKKGTGKIIV NGKTVEEYFG RQTSIMICKQ PLFLTNNAEA
FDIKVNVHGG GESGQAGAVR HGVTRALIDY DAALKPELSN AGFVTRDARE VERKKVGLHG
ARRRKQFSKR
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