Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3448 |
Symbol | |
ID | 6160281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 3851973 |
End bp | 3852338 |
Gene Length | 366 bp |
Protein Length | 121 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641666223 |
Product | iron-sulfur cluster assembly accessory protein |
Protein accession | YP_001792471 |
Protein GI | 171060122 |
COG category | [S] Function unknown |
COG ID | [COG0316] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00049] Iron-sulfur cluster assembly accessory protein |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0379124 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCG TTGCAGAAAA CATCCAGACC GAGATGCCCA GCCCCATCAT CTTCACCGAC AGTGCCGCCT CCAAGGTGGC GGATCTGGTC GCAGAGGAGG GCAATCCTGA CCTCAAGCTG CGCGTCTTCG TTCAGGGTGG CGGCTGCTCG GGTTTCCAGT ACGGCTTCAC CTTCGACGAA ATCGTCAACG ATGACGACAC CCAGATGTCG AAGAACGGCG TCACGCTGCT GATCGATGCC ATGAGCCTGC AGTACCTGGC CGGCGCCGAG ATCGACTACA AGGAAGATCT GCAGGGCGCC CAGTTCGTGA TCAAGAATCC GAACGCCACC ACCACCTGCG GTTGCGGGTC GAGCTTCTCG GCCTGA
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Protein sequence | MSAVAENIQT EMPSPIIFTD SAASKVADLV AEEGNPDLKL RVFVQGGGCS GFQYGFTFDE IVNDDDTQMS KNGVTLLIDA MSLQYLAGAE IDYKEDLQGA QFVIKNPNAT TTCGCGSSFS A
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