Gene Lcho_3448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3448 
Symbol 
ID6160281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp3851973 
End bp3852338 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content60% 
IMG OID641666223 
Productiron-sulfur cluster assembly accessory protein 
Protein accessionYP_001792471 
Protein GI171060122 
COG category[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00049] Iron-sulfur cluster assembly accessory protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0379124 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG TTGCAGAAAA CATCCAGACC GAGATGCCCA GCCCCATCAT CTTCACCGAC 
AGTGCCGCCT CCAAGGTGGC GGATCTGGTC GCAGAGGAGG GCAATCCTGA CCTCAAGCTG
CGCGTCTTCG TTCAGGGTGG CGGCTGCTCG GGTTTCCAGT ACGGCTTCAC CTTCGACGAA
ATCGTCAACG ATGACGACAC CCAGATGTCG AAGAACGGCG TCACGCTGCT GATCGATGCC
ATGAGCCTGC AGTACCTGGC CGGCGCCGAG ATCGACTACA AGGAAGATCT GCAGGGCGCC
CAGTTCGTGA TCAAGAATCC GAACGCCACC ACCACCTGCG GTTGCGGGTC GAGCTTCTCG
GCCTGA
 
Protein sequence
MSAVAENIQT EMPSPIIFTD SAASKVADLV AEEGNPDLKL RVFVQGGGCS GFQYGFTFDE 
IVNDDDTQMS KNGVTLLIDA MSLQYLAGAE IDYKEDLQGA QFVIKNPNAT TTCGCGSSFS
A