| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3438 |
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| Symbol | |
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| ID | 6160192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3840714 |
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| End bp | 3842045 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641666213 |
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| Product | hypothetical protein |
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| Protein accession | YP_001792461 |
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| Protein GI | 171060112 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0135692 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTGA AGTCCATCGC CACGACCGCG GCCATCGCCG CGGCCGGTCT TGCCAGCCTG
GTTTCGGCCA CCGCCGCGCA GGCCCAGGTC AAGGAGCAGT ACTTCCCGCT GCTGGTCTAT
CGCACCGGCC CGTACGCGCC CAACGGCGTG CCGTGGGCCA ACGGCAAGCA GGACTACATC
AAGATGATCA ACGCCCGTGA CGGCGGCATC AACGGCGTGA AGATCAGCTT CGAGGAATGC
GAGACCGGCT ACGCCACCGA CAAGGGCGTC GAGTGCTACG AGCGCCTCAA GGGCAAGGGC
GCCACGCTGA TCGATCCGCA GTCGACCGGC ATCACCTTCG CGCTCACCGA CAAGGCGCCG
GGCGACAAGA TCCCGCTGAT CACGCTCGGC TACGGCCTGT CGGCGGCGGC CGATGGCGGC
GTGTTCAAGT GGAACTTCCC GCTGATGGGC AGCTACTGGA CCGGCGCCGA CATGCTGATC
CAGCACATCG GCAAGAAGGA AGGCGGCCTC GACAAGCTGC GTGGCAAGAA GATCGCGCTG
GTCTACCACG ACAGCCCGTT CGGCAAGGAG CCGATCCCGC TGCTCGACGA GCGCCAGAAG
ATGCACGGCT TCGAGCTGGT CAAGATTCCG GTGACGGCGC CGGGCGTGGA GCAGAAATCA
GCCTGGCTGC AGGTGCGCCA GCAGCGCCCG GATTACGTGC TGCTGTGGGG CTGGGGCGTG
ATGAACTCGA CCGCGCTCAA GGAAGCGCAG GCCACCGGCT ACCCGCGCGA GAAGATGTAC
GGCGTCTGGT GGGCGGGTGC CGAACCCGAC GTCAAGGACG TCGCCGAAGG TGCCAAGGGC
TACAACGCGC TGGCGCTCAA CACCTCGGGC CAGCAGCCCA AGGTGATCCA GGACATCCTG
AAATACGTGC ACGACAAGGG CCAGGGCACG GGGCCGAAGG ATGAAGTGGG CTCGGTGCTC
TACACCCGCG GCCTGATCAT CCAGGCGCTG GGCGTTGAGG CGGTGCGCCG CGCGCAGGAG
AAGTACGGCA AGGGCAAGGT CATGACCAGC GAGCAGGTGC GCTGGGGCCT GGAGAACCTG
GCGCTCGACG ACAAGAAGCT CGCCACGCTG GGCCTGACCG GCGTGATCCG CCCGATCAGC
ACCTCGTGCC AGGACCACAT GGGCTCGACC TGGGCCCGCG TGCAGACCTG GGACGGCGCC
AAGTGGAGCT TCACGTCCGA CTGGCTGCAG GCCGACGAGA TGATCATCAA GCCGATGGTC
AAGGCCGCGG CCGACAAGTA CGCGGTCGAG AAGAAGCTGA CGCGCCGCGC ACCGGCCGAC
TGCCAAGGCT GA
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| Protein sequence | MKLKSIATTA AIAAAGLASL VSATAAQAQV KEQYFPLLVY RTGPYAPNGV PWANGKQDYI
KMINARDGGI NGVKISFEEC ETGYATDKGV ECYERLKGKG ATLIDPQSTG ITFALTDKAP
GDKIPLITLG YGLSAAADGG VFKWNFPLMG SYWTGADMLI QHIGKKEGGL DKLRGKKIAL
VYHDSPFGKE PIPLLDERQK MHGFELVKIP VTAPGVEQKS AWLQVRQQRP DYVLLWGWGV
MNSTALKEAQ ATGYPREKMY GVWWAGAEPD VKDVAEGAKG YNALALNTSG QQPKVIQDIL
KYVHDKGQGT GPKDEVGSVL YTRGLIIQAL GVEAVRRAQE KYGKGKVMTS EQVRWGLENL
ALDDKKLATL GLTGVIRPIS TSCQDHMGST WARVQTWDGA KWSFTSDWLQ ADEMIIKPMV
KAAADKYAVE KKLTRRAPAD CQG
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