| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3436 |
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| Symbol | |
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| ID | 6160190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3838575 |
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| End bp | 3839504 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641666211 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001792459 |
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| Protein GI | 171060110 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00170509 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGCTTTT TCCTGGAAAC CTTGTTCGGC GGCCTGATGG CGGGCATGCT GTATTCGCTG
ATCGCGCTCG GCTTCGTGCT GATCTACAAG GCCAGCGGCG TCTTCAACTT CGCGCAGGGC
GCGATGGTGC TGTTCGCGGC GCTGGCCATG GCGCGCTTCG CGGAGTGGGC GCCCCAGCTG
CTGGGCTTCG ACAACAAGAT CCTCGCCAAC CTGATCGGCT TCGGCATGGC GATGCTGGCG
ATGATCGCGG TGGCCTGGGT GATCGAGCGT TTCGTGCTCG GCAAGCTGGT CAACCAGGAA
GGCATCACGC TGCTGATGGC CACGCTGGGC ATCACCTACT TCCTCGACGG CTTCGGCCAG
ACGCTGTTCG GCTCGGACAT CTACAAGATC GACGTCGGCC TGCCCAAGGA CCCGCTGTTC
CTGTTCGAGA GCGTGTTCCA GGGCGGCGTG CTGATCAGCC AGGAGGACCT CTACGCCGCG
GTGATCGCCG CCGCGCTGGT GGCCGCGCTG AGCCTGTTCT TCCAGAAGAC CGCCACCGGC
CGCGCGCTGC GTGCGGTGGC CGACGACCAC CAGGCGGCGC AGTCGATCGG CATCCCGCTC
AGCCGCATCT GGGTCATCGT CTGGTCGGTC GCGGGCTTCG TCGCGCTGGT CGCCGGAATG
ATCTGGGGCA GCAAGCTGGG GGTGCAGTTC TCGCTCTCGC TGGTGGCGCT GAAGGCGCTG
CCGGTGGTGA TCCTGGGCGG CCTGACCAGC GTGCCCGGCG CCATCATCGG CGGCCTGATC
ATCGGCGTGG GCGAGAAGCT CTCGGAGGTC TACATCGGCC CGATGTTCGG CGGCGGCATC
GAGATCTGGT TCGCCTACGT GCTGGCGCTG CTGTTCCTGG TCGTGCGGCC GCAAGGCTTG
TTCGGCGAGA AGATCATCGA CCGCGTCTGA
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| Protein sequence | MGFFLETLFG GLMAGMLYSL IALGFVLIYK ASGVFNFAQG AMVLFAALAM ARFAEWAPQL
LGFDNKILAN LIGFGMAMLA MIAVAWVIER FVLGKLVNQE GITLLMATLG ITYFLDGFGQ
TLFGSDIYKI DVGLPKDPLF LFESVFQGGV LISQEDLYAA VIAAALVAAL SLFFQKTATG
RALRAVADDH QAAQSIGIPL SRIWVIVWSV AGFVALVAGM IWGSKLGVQF SLSLVALKAL
PVVILGGLTS VPGAIIGGLI IGVGEKLSEV YIGPMFGGGI EIWFAYVLAL LFLVVRPQGL
FGEKIIDRV
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