| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3394 |
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| Symbol | |
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| ID | 6163211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3771257 |
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| End bp | 3772093 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641666169 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001792417 |
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| Protein GI | 171060068 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCACGCCA CTGCTTCACT CGATGCCCCT TCGGTCGCCC CGCTGGTCGA ACTGCGTTCG
GTCACTTGCG GATACGGCGA TCGGGTCATC CTGCGCGACG TGAACCTGAC GGTGCCGCGC
GGTTCGGTGG TCGGCCTGAT GGGCACTTCG GGTGGCGGCA AGACGACGGT GCTGCGCCTG
ATCGGGCGAC AGCTCGGCGC GATGTCGGGC CAGGTGCTGT TCGATGGCGT GGACATCGCC
AGGCTCGATC GCCAGGGCCT GCACGAGGCG CGTCGGCGCA TGGGCATGCT GTTCCAGTTC
GGCGCGCTGT TCACCGACCT GTCGGTGTTC GACAACGTCG CCTTTCCGTT GCGCGAGCAC
ACCCGGCTCG GCGAGGAAAT GATCCGCGAC CTGGTGCTGA TGAAGCTCGA TGCGGTCGGC
CTGCGCGGCG CCCGTGACCT GATGCCCAGC CAGATCTCGG GCGGCATGAG CCGGCGCGTG
GCGCTGGCCC GCGCGATCGC GCTCGACCCC GAACTGATCA TGTACGACGA GCCTTTCGCC
GGCCTCGACC CGATCTCGAT GGGCGTGGCC GCGCGCCTGA TCCGCGAGCT CAACGATGCG
CTGGGTGTGA CCAGCATCGT CGTCTCCCAC GATGTCGACG AGACCTTCCT GATCGCCGAC
CACATCGTCT TCATCGCCAA CGGCAGCATC GCCGCGCAGG GCACGCCCGA CGAGATGCGC
GCCAGCGACG ATCCGCTGGT CCGGCAGTTC GTCAGCGCCG CGGCCGATGG CCCGGTGCGC
TTCCATTACC CCGCGGTGCC TGCACTCGAC GATTACCGAC TGGGGGTGCC GCGATGA
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| Protein sequence | MHATASLDAP SVAPLVELRS VTCGYGDRVI LRDVNLTVPR GSVVGLMGTS GGGKTTVLRL
IGRQLGAMSG QVLFDGVDIA RLDRQGLHEA RRRMGMLFQF GALFTDLSVF DNVAFPLREH
TRLGEEMIRD LVLMKLDAVG LRGARDLMPS QISGGMSRRV ALARAIALDP ELIMYDEPFA
GLDPISMGVA ARLIRELNDA LGVTSIVVSH DVDETFLIAD HIVFIANGSI AAQGTPDEMR
ASDDPLVRQF VSAAADGPVR FHYPAVPALD DYRLGVPR
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