| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3393 |
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| Symbol | |
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| ID | 6162081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3770481 |
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| End bp | 3771260 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641666168 |
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| Product | hypothetical protein |
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| Protein accession | YP_001792416 |
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| Protein GI | 171060067 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
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| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTGGG GACTGTCGGA TCTGGGTTAT TCGGTGCGCT GCAAGCTGGC CGACATCGGC
CTGGCGACGC GCCTGCTGCT GCGCCTGCTG GTGCTCACGC CGGTGGCCCT GCGGCGCTGG
CGGCTGGTGT TCGACCAGAT CCATTTCCTC GGCAACCATT CGCTGGCGAT CATCGGCGTG
TCGGGGCTGT TCGTCGGTTT CGTGCTCGGG CTGCAGGGGT ATTACACGCT GCAGCGCTAC
GGCTCGTCCG AGGCGCTCGG CCTGCTGGTG GCGCTGTCGC TGGTGCGTGA ACTCGGGCCG
GTGGTGACGG CGCTGCTGTT TGCCGGTCGG GCCGGCACCG CGTTGACGGC CGAGATCGGC
CTGATGAAGT CGGGCGAACA GCTCGCCGCG ATGGAGATGA TGGCCGTCGA CCCGATCCAG
CGCGTGCTGG CGCCGCGTTT CATCGGCGGC ATGGTGGCGA TGCCCTTGCT GGCCGCGGTG
TTCAGCGCGG TCGGCATCAT CGGCGGCTGG CTGGTCGGCG TCGTGATGAT CGGTGTCGAC
GCCGGCTCGT TCTGGTCGCA GATGCAAGGC GGCGTCGATG TCTTCAAGGA CATCGGCAAC
GGCGTCATCA AGAGCGTGGT GTTCGCGCTC ATCGTCACGT TCATCGCCCT GTTGCAGGGC
TACGAATGCC AGCCCACGCC CGAAGGGGTC GCGCGAGCGA CCACCCGCAC CGTGGTGGTG
TCGTCGCTGG CGGTGCTGGC GTTCGACTTC GTGCTCACCG CGCTGATGTT CTCGATTTGA
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| Protein sequence | MSWGLSDLGY SVRCKLADIG LATRLLLRLL VLTPVALRRW RLVFDQIHFL GNHSLAIIGV
SGLFVGFVLG LQGYYTLQRY GSSEALGLLV ALSLVRELGP VVTALLFAGR AGTALTAEIG
LMKSGEQLAA MEMMAVDPIQ RVLAPRFIGG MVAMPLLAAV FSAVGIIGGW LVGVVMIGVD
AGSFWSQMQG GVDVFKDIGN GVIKSVVFAL IVTFIALLQG YECQPTPEGV ARATTRTVVV
SSLAVLAFDF VLTALMFSI
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