| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3380 |
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| Symbol | |
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| ID | 6163364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3756975 |
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| End bp | 3758048 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641666155 |
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| Product | putative zinc protease protein |
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| Protein accession | YP_001792403 |
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| Protein GI | 171060054 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4324] Predicted aminopeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCGC GTGCCGCCCG GGTCGCATTG GTCGTAGTTG CCGCCGTGGC TTTGAGCGGC
TGCGCGCAGA TCGGCTATCT GTGGCAGTCG ACCGGCGGCC ACCTCAAGCT GCTGAACGCC
GCCAAGCCGG TCGACGAGGT GCTGGCCGAG CCCGGCCTGG CGCCGGCCCT GCGCGAGCGG
CTCGAACTCA GCCAGCGCCT GCGCGATTAC GCCGTCACCG CGCTGCACCT GCCCGACAAC
GCCAGCTACC GCCGCTACGC CGATCTCGGC CGCAGCGCCG CGGTCTGGAA CGTGGTGGCC
GCGCCCGAGC TGAGCCTGCA GCTCAAGACC TGGTGTTTCC CGGTGGTGGG CTGCGTCGGC
TACCGCGGTT ATTACGCCCA GGCTGATGCG CAGGTCGAGG CTGATGAGTT GAAGGCGCAG
GGCCTTGAAA CGATGGTCTA CGGCGTGCCC GCGTATTCGA CGCTCGGCAA GATCCCGGGC
CGTTTCTTTG CCGATCCGCT GCTCAACACC TTTGTCACCA GCTACAGCGA GATCGAGCTG
GCGCGGCTGA TCTTCCACGA GCTGTCGCAC CAGGTGGCGT ATGCGTCGGG CGACACCACC
TTCAACGAGT CGTTCGCCAC CGCGGTCGAG CGCATCGGCA GCGCCCGCTG GCTGGCCGAA
CAGCCGGCGG CGCAGCAGGA GCGCATCCGC ACCCAGAGCG CGCAGGCGGA CGCGCGGCGC
GACGACTTCC GGCGCCTCAC GATGGCGCTG CGCCAGGACC TCGACGCGAT GTACCGCAGC
CCGATCGGCG ACGACGAGAA GCGCCGCCGC AAGGCCGAGC TGATCGAGCG CGCGCGCGCC
GAACATGCCG CGCTGAAGGC CGGCGCGTGG GGCGGTTTTG CCGGCTACGA CGGCTGGTTT
GCCGGCATCA ACAACGCCCG CATCGGCGTG CTGGCGGCCT ACAACGCGCA GGTCGGCGAT
TTCGAGCGCC TGTTCGAGCG CCAGGGCCGC GACTGGCCAC GTTTCTACGC CGAGGTGCAG
CGCCTGGCCG CCTTGCCCGC CGCCGAGCGA ACGGCCGCGC TGGCGCGGCC CTGA
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| Protein sequence | MSARAARVAL VVVAAVALSG CAQIGYLWQS TGGHLKLLNA AKPVDEVLAE PGLAPALRER
LELSQRLRDY AVTALHLPDN ASYRRYADLG RSAAVWNVVA APELSLQLKT WCFPVVGCVG
YRGYYAQADA QVEADELKAQ GLETMVYGVP AYSTLGKIPG RFFADPLLNT FVTSYSEIEL
ARLIFHELSH QVAYASGDTT FNESFATAVE RIGSARWLAE QPAAQQERIR TQSAQADARR
DDFRRLTMAL RQDLDAMYRS PIGDDEKRRR KAELIERARA EHAALKAGAW GGFAGYDGWF
AGINNARIGV LAAYNAQVGD FERLFERQGR DWPRFYAEVQ RLAALPAAER TAALARP
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