Gene Lcho_3377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3377 
Symbol 
ID6161077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp3753147 
End bp3753467 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content73% 
IMG OID641666152 
Productcytochrome c class I 
Protein accessionYP_001792400 
Protein GI171060051 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTCTC GCGCGGCCCT GGCCGTGGCA CTCGCCGCCT CATGCGGCGT GGCCACGGCC 
GACGACATCG CCCAGGGGCG GGCCAAGTCC CGCGCCTGCG CGGTGTGTCA CGGGCCGCTG
GGCATGGGCA CGGCGCCCGA TGCGCCACAC CTCGCCGCCC AGCCCGCCAC CTACCTGAGC
CAGCAGCTGC GGGCCTTCCG CAGCGGCGAG CGCAAGCACG CGGTGATGAA CGTGATCGCC
AAGCCGCTGA GCGATGCCGA CATCGAGCAG CTCTCGGCCT GGTTCGCCTC GCTGCAGATC
GAGGTCAGGC CGCCGCCCTG A
 
Protein sequence
MFSRAALAVA LAASCGVATA DDIAQGRAKS RACAVCHGPL GMGTAPDAPH LAAQPATYLS 
QQLRAFRSGE RKHAVMNVIA KPLSDADIEQ LSAWFASLQI EVRPPP