| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3332 |
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| Symbol | |
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| ID | 6160766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3710222 |
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| End bp | 3711739 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641666107 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_001792355 |
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| Protein GI | 171060006 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGCAC CCGACGCATA CCTCGCCACC ACCGACGTGG GCCACCACAT CAACGGCCGT
GCCGTGCCCG GCAACGGCCG CACGCAGCCG GTCTTCAACC CGGCCACCGG CGCAGTGGCG
CGCCAGCTGC AGCTGGCCAC CGTCGAGGAC GTGAACGCGG CGGTCGCGGC GGCGCAGGCG
GCGTTCCCGG CCTGGTCGCA GACCCCGGCG ATCCGGCGCG CCCGCGTCAT GAACAACTTC
CTGGCGCTGG TCAACCAGCA CAAGGACACG CTGGCGGCGA TGATCACCGC CGAACACGGC
AAGGTCTTCA CCGACGCGCA GGGCGAGGTG ATGCGCGGCA TCGACATCAT CGAGTTCGCC
TGCGGCATCC CGCAGCTGCT CAAGGGCGAC TACACCGAGC AGGTCTCGAC CGGCATCGAC
AACTGGACCA TGCGCCAGGC GCTCGGCGTG GTCGCCGGCA TCACGCCGTT CAACTTCCCG
GTCATGGTGC CGTGCTGGAT GTTCCCGGTG GCGATCGCCT GCGGCAACAC CTTCGTGCTC
AAGCCCAGCG AGCGCGACCC GTCGGCGGCC AACTTCATGG CCGATCTGCT CACGCAGGCC
GGCCTGCCCG ACGGCGTGTT CAACGTCGTG CAGGGCGACA AGCTGGCGGT CGACACGCTG
CTCGGCCACC CCGACGTCAA GGCGCTGAGC TTCGTCGGCT CGACCCCGAT CGCGCAGTAC
ATCTACGAAA CCGGCGCGCA TCACGGCAAG CGCGTGCAGG CGCTCGGCGG CGCCAAGAAC
CACATGGTGG TGATGCCTGA CGCCGATGTC GACCAGGTGG TCGACGCCCT GATCGGCGCC
GCCTACGGCT CGGCCGGCGA GCGCTGCATG GCGATCTCGG TGGCGGTGCT GGTGGGCGAC
ATCGCCGACA AGGTCGTGCC GCTGGTGGCC GAGCGCGCCC GTGCGCTGAA GATCAAGAAC
GGCATGGAGC TCGACGCCGA GATGGGCCCG ATCGTGACCG CCCAGGCGCG TGACCGCATC
GAGGGCTACA TCGGCATCGG CGTCGAAGAA GGCGCGCAGC TGGTGGTCGA CGGCCGCGGC
CACAAGGTGC CGGGCCACGA GGCGGGCTTC TTCACCGGCG GCACGCTGTT CGACCACGTC
ACGCCGCAGA TGCGCATCTA CAAGGAAGAG ATCTTCGGCC CGGTGCTGGC CTGCGTGCGC
GTGGCGACCT TTGCCGAAGC GGTCGATCTG ATCAACGCGC ATGAATACGG CAACGGCGTG
GCCTGCTACA CCAGCGACGG CAACGTGGCG CGCGAGTTCG CCCGCCACAT CCAGGTCGGC
ATGGTCGGCA TCAACGTGCC GATCCCGGTG CCGATGGCCT GGCACGGCTT CGGCGGCTGG
AAGAAGAGCC TGTTCGGCGA CATGCACGCC TACGGCGAAG AGGGCGTGCG CTTCTATACC
AAGCAGAAGT CGATCATGCA GCGCTGGCCC GCCAGCATTG CCAAGGGCGC CGAGTTCGTG
ATGCCGACGG CCAAGTGA
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| Protein sequence | MGAPDAYLAT TDVGHHINGR AVPGNGRTQP VFNPATGAVA RQLQLATVED VNAAVAAAQA
AFPAWSQTPA IRRARVMNNF LALVNQHKDT LAAMITAEHG KVFTDAQGEV MRGIDIIEFA
CGIPQLLKGD YTEQVSTGID NWTMRQALGV VAGITPFNFP VMVPCWMFPV AIACGNTFVL
KPSERDPSAA NFMADLLTQA GLPDGVFNVV QGDKLAVDTL LGHPDVKALS FVGSTPIAQY
IYETGAHHGK RVQALGGAKN HMVVMPDADV DQVVDALIGA AYGSAGERCM AISVAVLVGD
IADKVVPLVA ERARALKIKN GMELDAEMGP IVTAQARDRI EGYIGIGVEE GAQLVVDGRG
HKVPGHEAGF FTGGTLFDHV TPQMRIYKEE IFGPVLACVR VATFAEAVDL INAHEYGNGV
ACYTSDGNVA REFARHIQVG MVGINVPIPV PMAWHGFGGW KKSLFGDMHA YGEEGVRFYT
KQKSIMQRWP ASIAKGAEFV MPTAK
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