| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3316 |
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| Symbol | |
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| ID | 6160841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3685020 |
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| End bp | 3685949 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641666091 |
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| Product | xylose isomerase domain-containing protein |
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| Protein accession | YP_001792339 |
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| Protein GI | 171059990 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTGGA ACGTGCGCAT CGGCATCAAC CCGATCTCCT GGATGAACGA CGACCTGCCC
TCGCTGGGCG GCGAGACGCT GCTCGAAACC GCTTTGGGCG AAGGCGCCGA GATCGGCTAC
GAGGGCTTCG AGCTCGGCAA CAAGTTCCCC AAGGACGGCC CGGGCCTGAA GGCCAAGCTC
GATGAATTCG GCGTGGCTTG CGTGTCGGGC TGGTACTCGG GTTTCCTGGC CGAGACCGAA
CCCGGCCAGA GCAACGCCGA CGCGGTGGCC GCCGAGATCG AGCGCGCCCG CGCCCACATG
AGCAAGCTGC AGTACAACGG CGCCAACGTC GTCGTCTACG GCGAATGCGC CGGCACCGTG
CAGGGCCAGA TCGACGTGCC GGTGTCCAAG CGCCCGCATT TCGCCAACGC CGCGTTGTGG
CAGGCCTATG CCGAGCGCCT GAACGCGTTC GGTGCGCACC TGATCGACAC CTACGGCATC
AAGCTCGCGT ACCACCACCA CATGGGCGCG TACGTCGAGT CGCCCGCCGA CGTCGACCAG
CTGATGGCGC TGACCGATCC GGCCAAGGTG TTCCTGCTGT TCGACACCGG GCACGCCTAC
TTTGGCGGTG CGGCCGACCC GGTGGCGCTG CTCAAGAAGC ACCTGTCGCG CGTGGTTCAC
GTGCATTGCA AGGACGTGCG CGCACAGGTC ATCACGACGG CACGCAACGA CGGCTGGAGC
TTCCTGAACG GCGTCATCAA CGGCACCTTC ACCGTGCCGG GTGACGGCGT GATCGACTTC
GACGCCGTGC TCACCACGCT CAAGAACGCC GGCTACGAAG GCTGGCTGGT GGTCGAGGCC
GAGCAGGATC CGGCCGTGGC GCCGAGCTAT CAGTACGCGC AGAAGGGCTA CCGCACGCTG
CGCGCGATCG TCGATCGGCT GAGCGCCTGA
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| Protein sequence | MTWNVRIGIN PISWMNDDLP SLGGETLLET ALGEGAEIGY EGFELGNKFP KDGPGLKAKL
DEFGVACVSG WYSGFLAETE PGQSNADAVA AEIERARAHM SKLQYNGANV VVYGECAGTV
QGQIDVPVSK RPHFANAALW QAYAERLNAF GAHLIDTYGI KLAYHHHMGA YVESPADVDQ
LMALTDPAKV FLLFDTGHAY FGGAADPVAL LKKHLSRVVH VHCKDVRAQV ITTARNDGWS
FLNGVINGTF TVPGDGVIDF DAVLTTLKNA GYEGWLVVEA EQDPAVAPSY QYAQKGYRTL
RAIVDRLSA
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