| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3313 |
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| Symbol | |
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| ID | 6160838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3679986 |
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| End bp | 3680915 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641666088 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001792336 |
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| Protein GI | 171059987 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGA TGTTGATCGT CGCTGCCGCT GCTGCTGCCA CCCTGGCCGC CCCGATGGCC
CACGCCCAGA AGGTCGGTCT GGCGATGGCC GAGCTGGACA CCTTCCTGAC GATCCTGAAG
AACGGCACCG TCGATGCCGG CAAGAAGGCC GGCGCCACCG TGCAGGTCGA AGACGCGCAG
GGCGACGTGG GCAAGCAGCT GAGCCAGATC CAGAACCTGA TCGCGCAGAA GGTCGACGCC
ATCATCGTCA ACCCGGTCGA CACCGACGCG ACGCCCAAGA TCACCAAGAT GGTGACCGAC
GCCAAGATCC CGCTGGTCTA CGTGAACCGC AAGCCGGTCG ACTTCGCCAA GCTGCCCGCG
GGCGTGGCCT TCGTGGCGTC CGACGAAAAG GTCTCGGGCA CGGTGCAGAC GCAGGAGGTC
TGCCGCCTGC TCAAGGGCAA GGGCAACGTG CTGGTGCTGA TGGGCGAGCT GAGCAACGAA
GCCGCGCGCA CCCGCACGCA GGACATCGAG GACGTCGTCG CCACCAAGGA ATGCAGCGGC
ATCAAGATCG CCGACAAGCG CGAAGGCAAG TGGAGCCGCA CCAACGGCCA GGACATCATG
ACCAACTGGC TGTCGTCGGG CGTGAAGTTC GATGCCGTGA TCGCCAACAA CGACGAGATG
GCGATCGGCG CCATCAACGC GCTCAAGGCC GCCAAGAAGT GGACGCCGGC CTCGATCGTC
GCCGGCATCG ATGCCACGCC GGACGCGCTG GCTTCGATGA AGGCGGGCGA CCTGAAGGTC
ACGGTGTTCC AGAACGCCGC CGGCCAGGGT TCGGGCGCGG TGGAGACGGC GCTCAAGCTG
ATCAAGAAGC AGCCGGTCGA CCGTTTCGTG AACGTGCCGT TCGAGCTGGT GACGCCGGCC
AACCTGGCCA AGTACTCGGG CAAGAACTGA
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| Protein sequence | MKKMLIVAAA AAATLAAPMA HAQKVGLAMA ELDTFLTILK NGTVDAGKKA GATVQVEDAQ
GDVGKQLSQI QNLIAQKVDA IIVNPVDTDA TPKITKMVTD AKIPLVYVNR KPVDFAKLPA
GVAFVASDEK VSGTVQTQEV CRLLKGKGNV LVLMGELSNE AARTRTQDIE DVVATKECSG
IKIADKREGK WSRTNGQDIM TNWLSSGVKF DAVIANNDEM AIGAINALKA AKKWTPASIV
AGIDATPDAL ASMKAGDLKV TVFQNAAGQG SGAVETALKL IKKQPVDRFV NVPFELVTPA
NLAKYSGKN
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