| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3299 |
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| Symbol | |
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| ID | 6162210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3666209 |
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| End bp | 3667474 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641666074 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001792322 |
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| Protein GI | 171059973 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTCT CGTCCCCCCT TCGCCGCAGC CTCGTCGTCC TGGGCCTGGC TGCCCTCGGT
GCCAGCGCCG CCCAAGCCCA GACCTCGCTG TCGATGTGGT ATCACGGTGC CGGCAACCCG
AAGGAGAAGG AGCTGATGAC GGGGATCATC AGCGACTTCA ACAAGAGCCA GAAGGAGTGG
AAGGTCGAGC TGCAGCAGTT CCCACAGGAG GCCTACAACA CCTCGGTGGT GGCCGCCGCG
GTGGCCGGCA AGCTGCCTGA CATCCTCGAC GTCGACGGCC CGGTGATGCC CAACTGGGCC
TGGTCGAAGT ACCTGCAGCC GCTGGCCCTG CCGGCCGGCG CGACCGACAA GTTCCTGCCC
GGCACGATCG GCACCTACAA CGGCAAGGTC TACTCGGTCG GCCTGTGGGA CGCGGCCTGT
GCGATGTTTG CCCGCAAGTC GGTGCTGCAG GCCCACAACA TCCGCATCCC GACGCTCGAC
AAGCCCTGGA CCAAGGCCGA GTTCGACGCC GCACTCGTGA CGCTGCAAAA GAGCGGCAAG
TTCCAGTACC CGATCGACCT GGGCCTGGCC TGGAAGGGCG AGTGGTACTC GTACGCCTTC
GGCCCCTTCC TGCAGAGCCA CGGCGGTGAC CTGCTGAACG CGGCTGCGCC CAAGGCCAAC
GGCACGCTCA ACGGCCGTGC CGGCGTCGAG TTCGGCACCT GGTGGCAGAG CCTGTTCACG
CGCAAGCTGA CCCCGGGCAC CTCGCAGAGC GGCGCCGACC GCGAGACCGG CTTCCTCGAC
GGCAAGTACG CGCTGCAGTG GAACGGCAAC TGGGCCGCGC TGCCGGCGCT GAAGAAGTTC
GGCGACGACC TGGTCTTCCT GCCGGCGCCC GACTTCGGCA AGGGCCCGAA GATCGGCGCC
GCGTCGTGGC AGTTCGGCGT CTCGGCCACC AGCAAGAACG CCAAGGGCGC GAACGCCTTC
ATCGCCTTTG CGCTCAAGGA CAAGTACCTG GCGGCCTTCT CCGACGGTAT CGGCCTGATC
CCGTCGACCC CGGCGGCCGC GGCGCTGACG CAGAACTACA AGAAGGGCGG CCCGCTGGAG
GTGTTCTTCG CGCTGTCGGC CAAGCAGGCC ACGCTGCGCG CGTCGACGCC GGGTTATGCC
GGCGCGTCGG GCGAGTTCGA GAAGGCGCTG GCCGACATCG CCAACGGCGG CAAGGTCGCC
GATGCACTCG ACAACGCCGC CGACGCGATC GACGCCGACC TGAAGAAGAA CGGCAACTAC
CGCTGA
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| Protein sequence | MTVSSPLRRS LVVLGLAALG ASAAQAQTSL SMWYHGAGNP KEKELMTGII SDFNKSQKEW
KVELQQFPQE AYNTSVVAAA VAGKLPDILD VDGPVMPNWA WSKYLQPLAL PAGATDKFLP
GTIGTYNGKV YSVGLWDAAC AMFARKSVLQ AHNIRIPTLD KPWTKAEFDA ALVTLQKSGK
FQYPIDLGLA WKGEWYSYAF GPFLQSHGGD LLNAAAPKAN GTLNGRAGVE FGTWWQSLFT
RKLTPGTSQS GADRETGFLD GKYALQWNGN WAALPALKKF GDDLVFLPAP DFGKGPKIGA
ASWQFGVSAT SKNAKGANAF IAFALKDKYL AAFSDGIGLI PSTPAAAALT QNYKKGGPLE
VFFALSAKQA TLRASTPGYA GASGEFEKAL ADIANGGKVA DALDNAADAI DADLKKNGNY
R
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