| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3276 |
|---|
| Symbol | rpmA |
|---|
| ID | 6162911 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 3639108 |
|---|
| End bp | 3639365 |
|---|
| Gene Length | 258 bp |
|---|
| Protein Length | 85 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641666050 |
|---|
| Product | 50S ribosomal protein L27 |
|---|
| Protein accession | YP_001792299 |
|---|
| Protein GI | 171059950 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0211] Ribosomal protein L27 |
|---|
| TIGRFAM ID | [TIGR00062] ribosomal protein L27 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.000212602 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCACAGA AAAAAGGCGG CGGTTCCACA CGGAACGGCC GTGACTCCCA ACCGAAAATG
CTCGGTGTGA AGGCTTACGG CGGCCAGATG GTGAGCGCAG GCTCGATCAT CGTGCGCCAA
CGTGGCACCC GGTTCCACGC CGGCACCAAC GTCGGCATGG GTCGCGATCA CACGCTGTTC
GCGTTGGTCG ATGGCACCAT CTCGTTCGAC GTCAAGGGCG CGTCGAACCG CAAGACGGTG
TTCGTCACGC CGGTCTGA
|
|---|
| Protein sequence | MAQKKGGGST RNGRDSQPKM LGVKAYGGQM VSAGSIIVRQ RGTRFHAGTN VGMGRDHTLF
ALVDGTISFD VKGASNRKTV FVTPV
|
|---|
| |