Gene Lcho_3274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3274 
Symbol 
ID6162909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp3636737 
End bp3637855 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content67% 
IMG OID641666048 
Productgamma-glutamyl kinase 
Protein accessionYP_001792297 
Protein GI171059948 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0263] Glutamate 5-kinase 
TIGRFAM ID[TIGR01027] glutamate 5-kinase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.000170684 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGATG TTCTGAAAAA CGCCCGCCGC ATCGTCGTCA AGGTCGGTTC GAGCCTGGTG 
ACCAACGAGG GCCGCGGCCT CGACGCCGAG GCGATCAACG CCTGGTGTGT GCAACTCGCC 
GCGCTGGTGC GCCAGGGCCG CGAGGTCGTG ATGGTGTCGT CCGGTGCCAT CGCCGAAGGC 
ATGAAACGCC TGGGCTGGTC GACCCGGCCG AAAGAGTTGC ACGAGTTGCA AGCCGCCGCC 
GCTGTCGGCC AGATGGGCCT GGCGCAGGTC TACGAAACCA GCCTGCGCGA ACAAGGCCTG 
GGCAGCGCCC AGGTGCTGCT GACCCACGCC GACCTGGCTG ACCGTGAGCG CTATCTCAAC 
GCCCGCTCGA CGCTGCTGAC GCTGCTCGGT CTGGGCGTGG TGCCGGTCAT CAACGAGAAC 
GACACCGTCG TGACCGACGA GATCAAGGTC GGCGACAACG ACACGCTGGG CGCGCTGGTG 
GCCAACCTGG TCGATGCCGA CGCCCTGGTC ATCCTCACCG ATCAGCGTGG GCTGTATTCG 
GCCGACCCGC GCAAGGACCC GAATGCGCAG TTCATCCACG AGGCCGAGGC CGGCACGCCC 
GAACTCGAGC AGATGGCTGG CGGCGCCGGT TCGAGCATCG GCAAGGGCGG CATGATTACC 
AAGATCCTCG CTGCGAAGCG GGCTGCCGGC AGTGGTGCCT CCACCGTGAT CGCCTGGGGC 
CGCGAGAAGG ATGCGCTGCT GCGTCTGGTC GACGGCGAGG CCATCGGCAC CCTGCTGATC 
GCCAGCACGC CCAAGGTGGC GGCGCGCAAG CAGTGGATGG CCGACCACCT GCAGCTCAAG 
GGCTCGGTGC GGGTCGACGA CGGCGCGCTG CTCAAGCTGC GCGACGAAGG CAAGAGCCTG 
CTGCCGATCG GCGTGGTCGA GGTGCAGGGC GACTTCGTGC GCGGCGACGT GATCGCGGTG 
CGCTCGCAAA AGGGCATCGA GATCGCCCGC GGCCTGGCCA ATTACGCAGC CAACGAGGCG 
CGCCTGATCG CGCGCAAGCC TTCGTCGCAG ATCGAGGGCC TGCTCGGTTA TGCCAACGAG 
GCCGAACTCA TCCACCGCGA CAATCTGGTC CTGGTGTGA
 
Protein sequence
MSDVLKNARR IVVKVGSSLV TNEGRGLDAE AINAWCVQLA ALVRQGREVV MVSSGAIAEG 
MKRLGWSTRP KELHELQAAA AVGQMGLAQV YETSLREQGL GSAQVLLTHA DLADRERYLN 
ARSTLLTLLG LGVVPVINEN DTVVTDEIKV GDNDTLGALV ANLVDADALV ILTDQRGLYS 
ADPRKDPNAQ FIHEAEAGTP ELEQMAGGAG SSIGKGGMIT KILAAKRAAG SGASTVIAWG 
REKDALLRLV DGEAIGTLLI ASTPKVAARK QWMADHLQLK GSVRVDDGAL LKLRDEGKSL 
LPIGVVEVQG DFVRGDVIAV RSQKGIEIAR GLANYAANEA RLIARKPSSQ IEGLLGYANE 
AELIHRDNLV LV