| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3267 |
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| Symbol | |
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| ID | 6163610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3625419 |
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| End bp | 3627806 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641666041 |
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| Product | ATPase central domain-containing protein |
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| Protein accession | YP_001792290 |
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| Protein GI | 171059941 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.115516 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAGAT TGGGGCCCAG ATCAACAGCC GGCCAGACCG CCGACACCAC GCCGGATGCG
ACCGCCGCGC GCCGCGTCGC CAGGCTCGCG GCCACCCGCG GCACGCGGCC GGTGGTGTCA
CCCGCCCTGC ACGCCGCGCC GGTGCTCGAC CTGCTGTGCT CGCACTTCGT GCTGACCCTG
ACGCTGCGCC ACGCGCCGCG TTTCACCGGC CGGCGCGACT GGAACAGCCT GCTCGCGCTG
ACCGCCCGCC ACCTGGTCTG GCCCACCACC GTGCTGGCGC GGCTGCGCGA GTTTCTCGCC
CGCCGCGTCA AGGGCCACGA CGGCTGGGCC CGCCACGAAC AGCTCGATGA CGCCGCCTTC
CTGGCCAAGC ACGGCTGGTG GCACGGGCCG TATGACGAGT CGACGCTGTT CTTCTACCTC
GACGACTACG TCAAGGACGC GCCCAAGGAC CTGATGTCGC TGCTCGGCTG CACCGCCGAG
TGGCTGGGGC GCGAGCTGCG CGCCGCCTCG ACGCTGGTGC AGAAGAACGT CGACGTGCTT
GGCGCGCTGC TGCAACTCAA CCCGGCCGAA CGCGCGCTGC TGCTCTACGG CACGCTGGCG
CGTTACCAGC GCGACCTGCG CGGGCTGCTG GTCGAGTTCA AGGTCTCGAG CGCGCAGGAG
GCCTACGCCA CGCTGGCCGA GGTGGCCGGG GTCGACGAAC GCGAGGTCGC CGAGGCGCTG
CGCGCGGGCA GCCGGCTCGA ACGCGTGGGC ATGATCGAGA ACCTGATCTC CGAGCACAAC
ATCACCGACC TCGCCGACCT GATGAAGGTG TCCGACCAGC TGCCGCCGGT GCTGATGCGC
GAATACCGCG ACCCGCAGGA CCTGATGGCG GTGTTCACCC GGCCGTCGGT CAAGAGCGAG
CTGGGCGCGG CCGATTTCGG CTACGTCGCC GAAGAGCTGC AGGTGCTGAC CACGCTGCTC
GGCCAGGCGG TGCAGCGCCG CGAGGCGGGT GTCAACGTGC TGCTCTACGG CCCGCCCGGC
ACCGGCAAGA CCGAGTTGGC GCGGGTGGCG GCGCAGGCCG CGGGGCTCGA TCTCTACGAG
GTCGAATACG CCGACCGCGA CGGCAACTCG CTGTCCGGGC GCGACCGCTA CCGCTCGCTG
CAGATCAGCC AGGTGTTCCT GAAGGCGAGC CCGCAGGTGG CGCTGCTGTT CGACGAGGTC
GAGGACGTGT TCCCGCCGAT CTCGTCGGAC GCCGCCCAGC TGATCGCGCG GCTGGAGGCA
GGCGAGAGCG GCGCCGGCCA TTCGGTCAAC GGCAAGGCCT GGGTGAACCA GATCCTGGAG
ACCAACCCGG TGCCGGTGAT CTGGCTGACC AACCGCATCG AGCAGATCGA CCCGGCGTTC
CGGCGCCGTT TCCAGTACCA CCTGGAGCTG AAATCGCCGC CGCCCGGCGC GCGCGAGGCG
CTGGTGACGC GGGCACTCAG CGGCGCGGCC GTCAGCCCGG CGTTCTGCCA GCGGCTGGCC
GAACGCCCGG CGCTGACACC GGCGCAGATC CGCACCGCCG TGCGGTTTGC GAGGCTGGTG
GGTGCGCCCG AAGGCGATGA CGTCGAGGCG CTGATCGAGC GCCAGATCGC CCACGCCGAC
CTCGCGCTGG GCAACCGGCC CGGCGCCAGC CGTGCGCAGC GGCCGGTGGT GACGCGCTAC
GACCTCGGCC TGCTCAACAT CGAGAGCCGC TATCCGGTCG AGCGCATCGT CGAATCGCTG
CGCCTGCGCG GCCACGGCGC GCTGTGTTTC TACGGCCCGC CGGGCACCGG CAAGACCGCG
CTGGCCGAGC ACATCGCCGA GCAGCTGAAG CGGCCGCTGA TGATCCGCCA GGCCAGCGAC
CTGATGAGCA AATACGTCGG CGAGACCGAG CAGGCGATGG CGCGCATGTT CGACGCCGCC
GAACACGAAC AGGCGGTGCT GCTGCTCGAC GAGGCCGACA GCTTCTTGCG CAGCCGCCAG
CGCGCCGAGC GCAACTACGA GGTCACCGAG GTGAACCAGA TGCTGCAGGG CATGGAGCGT
TTCGGCGGCA TCTTCATCTG CACCACCAAC CTGTTCACCG AGCTCGACGA GGCGGCGCTG
CGGCGCTTCA CCTTCAAGAT CGCCTTCCAG CCGCTGACCG CCGAGCAGCG TGTGCGCATG
TATGTGGCCG AGGCGCTGGG CGGCGATGCC GGCGCGCTGA ACGCCGAGCG CAGCACGCGG
CTGGCACATC TCGACCAGCT CGCCTGCGGC GACTTCGCGG CGGTGCAGCG CCAGGCCGAG
ATCCTGGGCG CGGCGCTCGA TGCGGACGAG TTCCTGTCGC AGCTCGAAGC CGAACACCGC
GTCAAGCCGC AGGTGCGCGA GCGGCGCGGC ATCGGCTTCC TGCGCTGA
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| Protein sequence | MRRLGPRSTA GQTADTTPDA TAARRVARLA ATRGTRPVVS PALHAAPVLD LLCSHFVLTL
TLRHAPRFTG RRDWNSLLAL TARHLVWPTT VLARLREFLA RRVKGHDGWA RHEQLDDAAF
LAKHGWWHGP YDESTLFFYL DDYVKDAPKD LMSLLGCTAE WLGRELRAAS TLVQKNVDVL
GALLQLNPAE RALLLYGTLA RYQRDLRGLL VEFKVSSAQE AYATLAEVAG VDEREVAEAL
RAGSRLERVG MIENLISEHN ITDLADLMKV SDQLPPVLMR EYRDPQDLMA VFTRPSVKSE
LGAADFGYVA EELQVLTTLL GQAVQRREAG VNVLLYGPPG TGKTELARVA AQAAGLDLYE
VEYADRDGNS LSGRDRYRSL QISQVFLKAS PQVALLFDEV EDVFPPISSD AAQLIARLEA
GESGAGHSVN GKAWVNQILE TNPVPVIWLT NRIEQIDPAF RRRFQYHLEL KSPPPGAREA
LVTRALSGAA VSPAFCQRLA ERPALTPAQI RTAVRFARLV GAPEGDDVEA LIERQIAHAD
LALGNRPGAS RAQRPVVTRY DLGLLNIESR YPVERIVESL RLRGHGALCF YGPPGTGKTA
LAEHIAEQLK RPLMIRQASD LMSKYVGETE QAMARMFDAA EHEQAVLLLD EADSFLRSRQ
RAERNYEVTE VNQMLQGMER FGGIFICTTN LFTELDEAAL RRFTFKIAFQ PLTAEQRVRM
YVAEALGGDA GALNAERSTR LAHLDQLACG DFAAVQRQAE ILGAALDADE FLSQLEAEHR
VKPQVRERRG IGFLR
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