| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3227 |
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| Symbol | |
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| ID | 6161985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3578342 |
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| End bp | 3579430 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641666001 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_001792250 |
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| Protein GI | 171059901 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAACTG CCCCCCGTAA GGCGCCCTCC CCCCAGACCC AGCCCACCAG CAGCGAAGTC
GCCCGACGCG CCGGCGTGTC GCGGACCACC GTCTCCTTCG TGCTCAACGG CGTGACCACC
CAGGGCATCA GCGAGGCCAC CCGCGAGAAA GTGCTCGCCG CCGCACGCGA GCTCGGCTAT
GAGCCACATG CGGCGGCGCG TTCACTGGCG GGCGGCTCCA CTGGCAACAT GGCCCTGGTG
ATCCCCAAGG TCGAACACCT GTATTTCGAC GCTTTTCTTG AGCAGCTGGT CGCCAGCATC
AACGAACACT GCCATCGCCA CGGCCTCAAG CTGCTGATCG AGACCCTCGA AGACCCGGGC
GGCAAGGCTG GCGGGTTCAT GAAACTGGTG CGCAGCCGGC GCATCGACGG ACTGATCATC
GCCCACCTGC GCGCTGGCGA GATCGAGTCC CTGCGGCAAC TGCGCGATGC CGGCATCCCG
CTGGTGGTGT TCGACCGAGA GCTGTCGAAG GCCGAGGGTT TCCACACCAT GGGCCACGAC
ACCCGGGCAT CGGCTCGCAT GGCGGTGAAC CATCTGATCG CGCTCGGGCA CCGGCGCATT
GGCCTGGTCA ACTACGCCCA GCCCGAGTTC CATTCGGTCA ACCAGCGTGA ACGTGGCTGG
CACCAGGCGC TGGCCGAGCA CGGCATCACT GCCGAGCCGC AGTGGGTGAC CCACGCCGAC
ATCACCGCCG AGAGCGGCTA CCGAGCCACC CGCGAGCTGC TCGCGCGAGG CGGCCGGCTC
ACGGCCCTGT TCGCCGGCAA CGACACCATC GCCTTCGGCG CGCTGCGCGC GCTGCACGAG
GCGGGTCTGC GCGTGCCGCA GGATGTCGCC GTGGTCGGCT ACGACGACAT CCCCTTCGCC
CCCTACGCCT CGCCGCCACT GACGACCGTG CGTTCCGATC CGGTCGGACA CGGCCGGCAG
GCGATCCAGA TGCTGCTGGC GCAGATCGAA GGACGCGACC CCGCCGCAGT GGAGCCGGTG
CCCGCGCCGA CCCTGGTGAT CCGAGAATCC TGCGGCGCCA GCCTGGCCGG ACGGATCGCG
CCCGGCTAG
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| Protein sequence | MPTAPRKAPS PQTQPTSSEV ARRAGVSRTT VSFVLNGVTT QGISEATREK VLAAARELGY
EPHAAARSLA GGSTGNMALV IPKVEHLYFD AFLEQLVASI NEHCHRHGLK LLIETLEDPG
GKAGGFMKLV RSRRIDGLII AHLRAGEIES LRQLRDAGIP LVVFDRELSK AEGFHTMGHD
TRASARMAVN HLIALGHRRI GLVNYAQPEF HSVNQRERGW HQALAEHGIT AEPQWVTHAD
ITAESGYRAT RELLARGGRL TALFAGNDTI AFGALRALHE AGLRVPQDVA VVGYDDIPFA
PYASPPLTTV RSDPVGHGRQ AIQMLLAQIE GRDPAAVEPV PAPTLVIRES CGASLAGRIA
PG
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