| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3226 |
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| Symbol | |
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| ID | 6161984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3577344 |
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| End bp | 3578201 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641666000 |
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| Product | peptidase C26 |
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| Protein accession | YP_001792249 |
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| Protein GI | 171059900 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2071] Predicted glutamine amidotransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAACGC TGGGCCGGGC AGGGGCGCTG AGCCGCGTGC CGGCCTACCC GCTGCCGGTG
CGCGAGCGGC CGCTGCTGAT CGGCATGTCG GCGCGGCTGA TGCACGTGCC GCCGGTCGAG
CTGGGGTTCC GCGGCAAGAC GCTGCAGTAC CTGGAGCAGT CGCTGGCGCA CTGGATCATG
GCGCACGGCG CGATGGCGGT GATGATCCCG ACGCTCGGCT TCGACGCCGA GGTGGAGCGC
CGCAAGGTCG GCGTGCACCA CTACGTCGAC ATGCTCGACG GCCTGGTGCT GCAGGGCGGC
GCCGACGTCA GCCCGCTGAG CTACGGCCAG CAGCCGCTGC GCCCCGAGTG GGCCGGCGAC
GCGGTGCGCG ACCGCTACGA GATCGAGCTG ATCGACGGTT TCCTCACCCA GGGCAAGCCG
ATGCTCGGCA TCTGCCGCGG CTGCCAGCTG CTCAACGTCG CCTTCGGCGG CAGCCTGCTG
CAGGACATCA ACACCCAGCG ACCCGACACG CGCCGCCACG TCGACGGCGT GCTCTACGAC
CAGCTGCAGC ACGGCCTGCG CTTCGAGCCC GGCAGCCGGC TGGAGAAGAT CTACGACGGC
CACGCCAGCC CGCGCGTCAA CAGCATCCAC CACCAGGCGG TCGACCGGCT GGGCTCCGAC
CTGGTGGTCG AGGCGCGCTG CGACGAAGAC GGCGTGGTCG AGGCGATCCG CTCACGCGGC
GACCTGTTCG TGGCCGGCGT GCAGTGGCAC CCGGAATTCC ATCTGCACAC CCGGGAACTG
CTCGACGCCG AGCCGCTGAT GAACGCCTGG CTGGCGGCGG TCAAGGCGCG CCGAGACGGC
ACGGCGGCAC CAGGCTGA
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| Protein sequence | MPTLGRAGAL SRVPAYPLPV RERPLLIGMS ARLMHVPPVE LGFRGKTLQY LEQSLAHWIM
AHGAMAVMIP TLGFDAEVER RKVGVHHYVD MLDGLVLQGG ADVSPLSYGQ QPLRPEWAGD
AVRDRYEIEL IDGFLTQGKP MLGICRGCQL LNVAFGGSLL QDINTQRPDT RRHVDGVLYD
QLQHGLRFEP GSRLEKIYDG HASPRVNSIH HQAVDRLGSD LVVEARCDED GVVEAIRSRG
DLFVAGVQWH PEFHLHTREL LDAEPLMNAW LAAVKARRDG TAAPG
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