Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3204 |
Symbol | |
ID | 6162329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 3548527 |
End bp | 3549480 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641665978 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001792227 |
Protein GI | 171059878 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAAAAA TCCTGGATCA CCGCCCGGAC TGCCCGGCGC CCCATGTCGA CCCCGACGAC CACAGCCCGG CCGCCCGCGC CGAACTGGGC CGGGTGATGC GCGAACAACT GGCCGCCTTC GCCGAGGGCC TGGCGCAAGG CACGCGCCGC CTGCACCGCC CGGCGCCGGC CGGGGTGGCG CGCGGCGAGG GCCATTTCCA CCTTGCGCCC GAGCTGTTCC TGCAGGTCAG CGGCTGGACG CGTTTCGGCC TGCCGCACGG CGAAGTCACC GTCGGCCCCG GCGAGGCCTT GCTGATGCCC GCGCGCCTGC TGCACCACGA GGCGGTGGGC GTGGCGGCCG ATGGCGAGCC GTTCCGCAAC ATCGTGGTCT ACGCCGACGG CCGGGTGCTG ACCTGCCACC TGGCGCACGA ACACGCGGCC GGCGAGCCCG GCATCCTCTT CCTCGAAGCC CGCCAGCATC CGCAGGCCGG GCGCGCCCAG GCCTGGCTGG CCGATGCGGC TGCGGTTGGC GACGAGCCCC ACGCGGCCGA AGAACAGCAG GCCCGCGCTC TGGTGATGGC CGTGCTGGCC GGCGTGCGCC GCGCACTCGA TGACGTGACG AGCGCCCCGA GCGCGGGCGA GCCACCGCTG ATCGCGCGGT TGCGGGTGCT GATCCAGAAC CAGCTCGGCG ACCATGAACT CAGCGTGCGC CGGCTGGCCG AACAATCCGG CTGCAGCGCC GATCACCTGT CGCATCGCTT TCGCCTGACT GCGGGTGAGC ATCTGGTGGC CTACCTCAAT CGACAGCGCA TGGAGCGTGC GGCACACCTG CTGGCGGACA CCGATCTGGC GGTCAAGGAG GTGGCGTGGG CTTGCGGGTT TGCGAGTGCG AGCTACTTCA TCCGCACCTT CCGTGCTCAT CACGGTGAGA CGCCGGTGGC CTGGCGGGGC ACGCATCAGA GGCAGGTGGC TTGA
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Protein sequence | MLKILDHRPD CPAPHVDPDD HSPAARAELG RVMREQLAAF AEGLAQGTRR LHRPAPAGVA RGEGHFHLAP ELFLQVSGWT RFGLPHGEVT VGPGEALLMP ARLLHHEAVG VAADGEPFRN IVVYADGRVL TCHLAHEHAA GEPGILFLEA RQHPQAGRAQ AWLADAAAVG DEPHAAEEQQ ARALVMAVLA GVRRALDDVT SAPSAGEPPL IARLRVLIQN QLGDHELSVR RLAEQSGCSA DHLSHRFRLT AGEHLVAYLN RQRMERAAHL LADTDLAVKE VAWACGFASA SYFIRTFRAH HGETPVAWRG THQRQVA
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