Gene Lcho_3158 details

Gene Information

• Locus tag: Lcho_3158
• ID: 6162735
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 3484435
• End bp: 3486441
• Gene Length: 2007 bp
• Protein Length: 668 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 641665933
• Product: peptidase S9 prolyl oligopeptidase
• Protein accession: YP_001792183
• Protein GI: 171059834
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 43
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCCAGAC ACCCGCACTT CAGCGTCGAC AGCCTCTGGC AACTGCAGCG CATGGGCCCG 
CCCAGCCTGT GCCCGGACGG CGCGCAGGCG GTGGTCTCGG TGACGCGCCA CGACATGGCG 
CACAACCGCT CGCACAGCGC GCTGTGGCTG CTGTCGACGC TGGGCGGCGC GCCGCGGGCG 
CTGACCCATT GCGGTGACAA GGACGGCCAG CCGGCCTGGA GCCCGCACGG CGACCTGATC 
GCCTTCATCG CCCGGCGCGA CCAGCAAGGC GCGAAGGACG AGGAGCCGCA GCTCTACCTG 
ATCGCCCCCG ACGGCGGCGA GGCGCAGCGC GCCGCCGTGC TGCCGACCGG CGTGGAGGCG 
TTCAAGTGGT TTCCGGACGG CAAGCGCATC GCCTTCATCG CCTGGGTCTG GCCGGATGCG 
CGCGGTGCCA AGGCGCAGGC GCTGCGCATG AAGGCCTGGC GCGAGCGCAA GGAAAGCGGC 
TACGCCACCA GCGAAGCGCT GTACCGCTGG TGGGACCACA ACCTGCCGCA GGACCGCGTG 
CCGCACCTGC TGGTGCTCGA CATCCGCAGC GGCCGGGTGC GCGACCTGTT CGAGGGCACG 
CCGTTCGAGC TGTCGCGCAC CGAGCTCGAC GGCAGCTGTT TCGACATCTC GCCCGACGGC 
CTGAACATCG CGTTCATGCA CGACCCGGCG CCGCACAAGC GCATCGACCA CTGCCACGCG 
CTGGCCGAGA TCGACCTGCG CAGCGGCGCG GTGCGCACGC TGGTGCAGGA CGCCGGCTGG 
CACCTCGAAG CGCCGAGCTA CAGCCCGGCC GGCGACCGCA TCGCCTTCAC GGCCAGCCAC 
CGCGGGCTCA AGCACACGAT GCCGCGCCAG CTGGCGCTGT GGGACAGAGA AACCGCCACC 
TGGTCGGTCG AGAGCGCGCA GTGGGATCAC GCGGTCAATG TGCCGCTGCA CTGGGAGGAC 
GACGGCCAGT CGCTGCTGTT CACCGCCGAG GATCGTGGCG AGCAGCCGCT GTGGCGCTTC 
GACCTGCCCG ACCGGCGCGC CGAGCGGGTG CAGGCACACG GCTGGGTGTC ATCGTTCGAC 
AAGCGCGCCG GCACCACGCT GATCCAGCTC GAAAGCGTCA GCCACCCGCC GCAGGCCTGG 
GTGCTGCCGC CGGGCGAGCC GGCGCGCCGC GTCGACCGCT TCAACGACTC GGTGCTGGCC 
AGCCACCCGA TGGGCCGCAG CGAGACGCAC ACGATCACCG GCGCGCTCGG CGACGGCGTG 
CAGATCCGGC TGATCTACCC ACCCGGCTTC GACCCGAGCC AGCGTTACCC GGTGCTGCAC 
CTGCTGCACG GCGGGCCGCA TTCGGTGTTC GGCGACAACT GGCACTGGCG CTGGAACCAG 
CACGTGTTCG CCGCCGCCGG TTACGTGGTG GCGTGTGTCA ACTTCCATGG TTCGAGCGGC 
TTCGGCTACG CCTTTCTGGA CTCGATCACG CACCGCTGGG GCGCCCTCGA ACTGCAGGAC 
ATCGAGGCCG CCAGCGACTG GCTGCTGGCC CAGCCCTGGG CCGACCCGCA GCGCGTGTAC 
GCGGCAGGCG GCAGCTACGG CGGCTTCCTG GTGGCGTGGA TGAACGCCCA GGTGCACAGC 
GGCCGCTACG CCGCCTACGT CTGCCACGCC GGCTGCTACG ACTGGCAGGC GATGTACGCC 
GATGACGCCT ACCCGTGGCA TGCCCGCGAG CTGGGCGCCG ACTACTGGGT CGACCCGGTC 
AAGGTGGCGG CGCAGAGCCC GTCGAGCTTT GCCGCCGACA TGCACACGCC CACGCTGGTG 
GTGCACGGCG CGCTCGACTA CCGCGTGCCC GATGCGCAGG GCCTGGCCTT CTACAACACG 
CTGCAGGCGC GTGGCATCGC CTCACGCCTG CTGTGGTTCC CGGACGAGAA CCACTGGATC 
CAGAAGCCGC GCAACAGCCG GCTCTGGTAT CAGGAGCTGC TGGCCTGGCT GGGCACGCAC 
CGGCTCACTT CTTCGACAGG GCCGTGA 

 

Protein sequence

MARHPHFSVD SLWQLQRMGP PSLCPDGAQA VVSVTRHDMA HNRSHSALWL LSTLGGAPRA 
LTHCGDKDGQ PAWSPHGDLI AFIARRDQQG AKDEEPQLYL IAPDGGEAQR AAVLPTGVEA 
FKWFPDGKRI AFIAWVWPDA RGAKAQALRM KAWRERKESG YATSEALYRW WDHNLPQDRV 
PHLLVLDIRS GRVRDLFEGT PFELSRTELD GSCFDISPDG LNIAFMHDPA PHKRIDHCHA 
LAEIDLRSGA VRTLVQDAGW HLEAPSYSPA GDRIAFTASH RGLKHTMPRQ LALWDRETAT 
WSVESAQWDH AVNVPLHWED DGQSLLFTAE DRGEQPLWRF DLPDRRAERV QAHGWVSSFD 
KRAGTTLIQL ESVSHPPQAW VLPPGEPARR VDRFNDSVLA SHPMGRSETH TITGALGDGV 
QIRLIYPPGF DPSQRYPVLH LLHGGPHSVF GDNWHWRWNQ HVFAAAGYVV ACVNFHGSSG 
FGYAFLDSIT HRWGALELQD IEAASDWLLA QPWADPQRVY AAGGSYGGFL VAWMNAQVHS 
GRYAAYVCHA GCYDWQAMYA DDAYPWHARE LGADYWVDPV KVAAQSPSSF AADMHTPTLV 
VHGALDYRVP DAQGLAFYNT LQARGIASRL LWFPDENHWI QKPRNSRLWY QELLAWLGTH 
RLTSSTGP