Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3120 |
Symbol | |
ID | 6164061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 3450261 |
End bp | 3450782 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641665895 |
Product | glyoxalase/bleomycin resistance protein/dioxygenase |
Protein accession | YP_001792145 |
Protein GI | 171059796 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGCT TTCACGTCCA TCTGCATGTC GACGACCTGG CCACCAGCGT CGGCTTCTAC TCCAAGCTTT TCGCGGCCGA ACCGGCCCGG CTCGAGGGCG ACTACGCCAA GTGGATGCTC GAAGATCCGC CGGTCAACTT CGCGATCTCG ACCCGGGGTT CGAAACCGGG CATCGACCAC CTCGGCATCC AGACCGACGA TCCCGCCGAG CTGGCCGCCC TGAAAGCGCG CGCCGAGGCG GCCGACATGG CCCTGCTCGA CGAGGGTGAG ACGACCTGCT GCTACGCCCG CAGCGAAAAG CACTGGATCA CCGACCCGCA GGGCATCGCC TGGGAGCATT TCCATACGCT GGGCAACATC CCGGTGTTCA ACGAAGCCGC TGCCCCGGCC GCTGCCGCAT CGGCTTGCTG TGCACCGACC GACGCTGCCG CCGCAAGCAG CGAACCCGCC GCCTGCTGCG CGCCCACGCC GCGTGGCAAG CCCATCGGCA TTGCGGTCAA GTCGGCCAAT TCGTGCTGCT GA
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Protein sequence | MKRFHVHLHV DDLATSVGFY SKLFAAEPAR LEGDYAKWML EDPPVNFAIS TRGSKPGIDH LGIQTDDPAE LAALKARAEA ADMALLDEGE TTCCYARSEK HWITDPQGIA WEHFHTLGNI PVFNEAAAPA AAASACCAPT DAAAASSEPA ACCAPTPRGK PIGIAVKSAN SCC
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