| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3114 |
|---|
| Symbol | |
|---|
| ID | 6164069 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 3445641 |
|---|
| End bp | 3446177 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641665889 |
|---|
| Product | MxaD protein |
|---|
| Protein accession | YP_001792139 |
|---|
| Protein GI | 171059790 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 68 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGAC GCCCCTTTCA TCGCCACCTC CTGATGCTGC TGGCGCTGCT GACCGTGCCG
CTGGCCGGCC AGGCCCACGG CCCGACCCGC CAGAAGGTGA CCGAGAGCAT CACCATCGAC
GCCCCCGCCG CCACCGTCTG GGCCCGCATC CAGGATTTCG ACGCGCTCAA GAACTGGCAC
CCGGCGGTGG CCGAGAGCGC GGCCGACAAG GGCAACGAGG TCGGCTCGGT GCGGATCGTC
AAGCTCAAGG GCGGCGGCGA GCTGGTCGAA TCGCTCGAAC GCCACGACGC CGCGCAGAGG
CTCTACAGCT ACCGCGCCAA GAACGGCGGC GCGCTGCCGG TCACCAACTA CAGCTCGACG
ATCCGCGTCA GCGAGGCCGC CGGCAAGGCC AGCGTCGAGT GGCGCGGCGC CTTCTACCGC
GGCTACCCCA ACAACGACCC GCCGCCGGAC CAGAACGACG AGGCCGCGGT CAAGGCCGTC
ACCGGCGTCT ACCAGAGCGG GCTGGCGAAC CTGAAATCGC TGGTCGAAGG CAAGTAG
|
|---|
| Protein sequence | MTRRPFHRHL LMLLALLTVP LAGQAHGPTR QKVTESITID APAATVWARI QDFDALKNWH
PAVAESAADK GNEVGSVRIV KLKGGGELVE SLERHDAAQR LYSYRAKNGG ALPVTNYSST
IRVSEAAGKA SVEWRGAFYR GYPNNDPPPD QNDEAAVKAV TGVYQSGLAN LKSLVEGK
|
|---|
| |