Gene Lcho_3112 details

Gene Information

• Locus tag: Lcho_3112
• ID: 6164067
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: -
• Start bp: 3443959
• End bp: 3444528
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 641665887
• Product: hypothetical protein
• Protein accession: YP_001792137
• Protein GI: 171059788

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 65
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACCATCG ACCGCATCGA GACCCCGGCC CTGTTGACCC GCCGCCGCTG CCTGCTGGCG 
GCGGCCGGGG CCTGTGTCGT CAGCAGCCGC GCCGTGCAGG CGCAGGCCGA GGTGCCGACG 
CTGGCCTTCC TCGGCTTCGA GCTGATCGAT GACCAGCCCG ATCCGGCCCG CCTGCCGGCG 
CTGCAGGCGC GCCTGGCGAT GATCGATCGG CAGATGGCGC AGGGGCTCGA CGAACGCGGA 
CTTTACCGCG TGCTGGCGCT GGCGCCGGCG CAGGCCGCGA TCGAACATGC GCGTGCCGAG 
AACCAGTACC TGCACCGCTG CAACGGCTGC CTGGCGGGCG TGGGCGATGC GCTGGGCACG 
CAGCGGGTGG GGGTGGGCTG GGTGCAGCGC GTCAGCAACC TGATCCTCAA CATCAACCTG 
GGCGTCTGGC AGGTGCGCGA GGACCGCCTG GTGCTGACCA AGTCGGTCGA CATCCGCGGT 
GACAACGATG AATCCTGGCG CCGCGGCGTG GCCTACATGC TGCGCGACAT GGTCGAGCGG 
CGCGCCCGCC AGCCGCGCTA CGGCATCTGA 

 

Protein sequence

MTIDRIETPA LLTRRRCLLA AAGACVVSSR AVQAQAEVPT LAFLGFELID DQPDPARLPA 
LQARLAMIDR QMAQGLDERG LYRVLALAPA QAAIEHARAE NQYLHRCNGC LAGVGDALGT 
QRVGVGWVQR VSNLILNINL GVWQVREDRL VLTKSVDIRG DNDESWRRGV AYMLRDMVER 
RARQPRYGI