| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3064 |
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| Symbol | |
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| ID | 6162719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3390383 |
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| End bp | 3390976 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641665839 |
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| Product | hypothetical protein |
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| Protein accession | YP_001792089 |
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| Protein GI | 171059740 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2862] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00645] conserved hypothetical transmembrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.686799 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGAAC CCCTCAGCCC GAAACCGGGC GCGTTGGCCA ACCTGATCTT CGCCAGCCGC
TGGTTGCAAT TGCCGCTCTA CCTGGGACTG ATCCTGGCGC AGGGTGTCTA CGTCTTCCAC
TTCTGGGTCG AACTGGTGCA CCTGATCGAG GCGGCGTTCG GCAACCAGGC CGCGCTCGCC
CAGCTGGTGG GCAGCATCGG CTACAAGAGC GACATCCAGG TCTCGCAGCT CAACGAGACC
ATCATCATGC TGGTGGTGCT AGCACTGATC GACGTGGTGA TGATCAGCAA CCTGCTGATC
ATGGTGATCA TCGGCGGCTA CGAGACCTTC GTGTCGCGCC TGGGCCTCGA GGAGCACCCG
GACCAGCCCG AGTGGCTGAG CCACGTCAAC GCCTCGGTGC TCAAGGTCAA GCTGGCCACC
GCCATCATCG GCATCAGCTC GATCCACCTG CTCAAGACCT TCATCAACGC CGAGAACTAC
TCCGAGAAGG TGCTGATGTG GCAGACCGTG ATCCACATCG CCTTCCTGTT CTCGGCGCTG
TCGATCGCCT ACGCCGACCG CCTGATGTCG GCAGGCAAGC CTGACGACCA CTGA
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| Protein sequence | MKEPLSPKPG ALANLIFASR WLQLPLYLGL ILAQGVYVFH FWVELVHLIE AAFGNQAALA
QLVGSIGYKS DIQVSQLNET IIMLVVLALI DVVMISNLLI MVIIGGYETF VSRLGLEEHP
DQPEWLSHVN ASVLKVKLAT AIIGISSIHL LKTFINAENY SEKVLMWQTV IHIAFLFSAL
SIAYADRLMS AGKPDDH
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