| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3054 |
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| Symbol | |
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| ID | 6163671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3378637 |
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| End bp | 3380814 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641665829 |
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| Product | ATPase central domain-containing protein |
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| Protein accession | YP_001792079 |
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| Protein GI | 171059730 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.000821112 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACGCGC CGGCCTGCGC CACCACCCTC GCGGCCAGCC TGATGCCGCC GCTGCACGCG
CTGGCGCTCG GCGCCTTGCC ACAGGCCGCG GGCGATGCGG CGGATTCCAA TGCATCGGCC
GAGGCCGGCT GGCTGCGCGC GCAGCGGGTC GGCGAGCCGG GGCTGTACAG CTGGCACGCC
TGGGCCGCGT CGCCGCCGCC GGCCGACCGC CTGCTGCACA CGCTGGCGAC GGGCCTGCCG
CTGCGGCCGG TCGAGGTGAT CGCGGTGGCG CTGGCGGTGG CCGCCGAACT CGATGCCAGC
GTGGCGCGGG TGGTGGCGTG GCTGCAGGCG CCGGCCGGCA CCAGCGCGAG CAGCAGGCCG
AACGTCGGTC TGCTGCTCGC GCTGGCGCAG GCGCTGGGCG TGGGCGCATC GGCGGGCGAT
CTGCTCGACG GCAGCGCCCG CGCGACCGGT CTGCTGCAGC TGGAGATGGA CGCCGACCCG
GCCGCCGGCC CGCGCGCGAC GGCAGCGCCC GTGCTGCCGC TGGTCGAGCA GTCCGTGCAG
GTGCCGCTGC CGCTGGCGCT GCTGCTGCGC GACGGCCAGG CGCGCTGGCC CGGCGTGGCG
CTGCTGACGG GCGACGAGGA GCCCGCGCCC GCTTCCTTGC GCGAGGCCGC GGCGCGCCAG
GCCGCGGCGC TGCGCCTGGC GCAGTCCTGG CGTGCGGATG CGGCCTCGCA CTCCAGCGGC
CCGGCGCTGG TGGTGCGCGC CGGCCATCCG CGGGTGGCGC GCGCGGCGGC GGCCTGGGTG
GCGCAGGCGC TGGGGCAGCG CGCGGCGGTG TTCGACAGCG ATGCGGCGGA TCGGCACGGT
GCCGGCAGCC CGGCCGGCGC CGCTCACGGC ACCGGCGCGG CGCCACGTGG CAGCGGCCTG
TGGCTGGTGG CCAACGGCGC GCTGCCGGTG TGGTGCGTCG AGCTGGCGCC CGGCGAGACC
CGCCACCTGC CGAGCTGGCC CGGTTACCGC GGCCCGGTGC TGGTGGCCTG CGGGCCCGAC
GGCTGCATCG AGAGCGATGG CGACACGCTG CCGAGCTGGC GCGTGCCGCT GCCGCTGGCC
GGCGAACGCA GCGCGTTGTG GCTGGCCGTG ACCGGCGACG CCGCCCTCGC CGCGCAGCTG
GGCACGCAGC AGCGCCACGA CGCCGCGCGC ATCCGCCTGC TCGGCCGCGC CGCCCGGCAC
CAGGCGCATC TCGAAGGCGC CGCGCAGGTC GGCTGGGCGC AGCTGGGCCG CGCCGCGCGC
CAGGGCGTGG CGGCCGATCT CGGCACGCTG GCCGAGCTGA TGCCCGAGGC GATCGACGAC
GCAGCGCTGG TGGTCTCGCC CGCACTGGGC GCCACGCTGG CCGCGCTGCA GCAGCGCTGC
CAGTGCCGCG AGGGCCTGAC CGACGGCCTC GGCCCGGCCG CGCGGGCGCG TTACCGGCCG
GGCGTGCGCT CGCTGTTCGT CGGCCCGTCG GGCACGGGCA AGACGCTCGC TGCCGGCTGG
CTGGCGACCC GGCTCGGCCT GCCGCTGTAC CGCGTCGACG TGGCGTCGGT CAGCAGCAAG
TACATCGGCG AGACCGAGAA GAACCTGTCG CAGCTGTTCG CGCGCGCCGA ACACGCCGAG
GTGGTGCTGC TGTTCGACGA GGCCGACGCG CTGTTCGGCA AGCGCACCGA GGTCAAGGAA
TCGAACGACC GCCACGCCAA CGCGCAGACC AACTACCTGC TGCAGCGCAT CGAGTCGTTC
GAGGGCATCG CGATCCTGAC CAGCAACAGC CGCAGCCGCT TCGACAGCGC CTTCACGCGC
CGGCTCGATG CGATCGTCGA CTTTCCGGCG CCGACGCCGC AGGAGCGGCA CGCGCTGTGG
CGCGCGCATC TGGGGGAGAC ACAGCTGCAG GAGCAACTGC ACGGGCGCCT GCATGCACGA
CAGCAGCCAC AGCGGCTCGA CGTCGCGCTG CTCAACCGCA TCGCCAGCAG CTGCGACCTG
GCCGGCGGCC ACATCCGCAA CGCCGTGCTG GCCGCCGCGG CCTGTGCCCA CGCGGCGGGC
GGCGCGATCA CCGAGGCGCA GCTGCTGCAG GCGATCGCGG CCGAATACCA GAAGCTCGGC
AAGGCGCTGC CGGCCGGCCT GGCCGAGAGA CACGGCGCCA CCCCGCGCCC ACCATCCGAT
CCGCAGGAGT CGCCATGA
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| Protein sequence | MNAPACATTL AASLMPPLHA LALGALPQAA GDAADSNASA EAGWLRAQRV GEPGLYSWHA
WAASPPPADR LLHTLATGLP LRPVEVIAVA LAVAAELDAS VARVVAWLQA PAGTSASSRP
NVGLLLALAQ ALGVGASAGD LLDGSARATG LLQLEMDADP AAGPRATAAP VLPLVEQSVQ
VPLPLALLLR DGQARWPGVA LLTGDEEPAP ASLREAAARQ AAALRLAQSW RADAASHSSG
PALVVRAGHP RVARAAAAWV AQALGQRAAV FDSDAADRHG AGSPAGAAHG TGAAPRGSGL
WLVANGALPV WCVELAPGET RHLPSWPGYR GPVLVACGPD GCIESDGDTL PSWRVPLPLA
GERSALWLAV TGDAALAAQL GTQQRHDAAR IRLLGRAARH QAHLEGAAQV GWAQLGRAAR
QGVAADLGTL AELMPEAIDD AALVVSPALG ATLAALQQRC QCREGLTDGL GPAARARYRP
GVRSLFVGPS GTGKTLAAGW LATRLGLPLY RVDVASVSSK YIGETEKNLS QLFARAEHAE
VVLLFDEADA LFGKRTEVKE SNDRHANAQT NYLLQRIESF EGIAILTSNS RSRFDSAFTR
RLDAIVDFPA PTPQERHALW RAHLGETQLQ EQLHGRLHAR QQPQRLDVAL LNRIASSCDL
AGGHIRNAVL AAAACAHAAG GAITEAQLLQ AIAAEYQKLG KALPAGLAER HGATPRPPSD
PQESP
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