Gene Lcho_3010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3010 
Symbol 
ID6160853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp3324634 
End bp3325344 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content71% 
IMG OID641665785 
Productcytochrome B561 
Protein accessionYP_001792035 
Protein GI171059686 
COG category[C] Energy production and conversion 
COG ID[COG3658] Cytochrome b 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC ACACGAGCCC CTGCGAGCCG ACCGGCCGGG TGCTGGTCTG GGACCTGCCG 
GTGCGGGTCT TCCACTGGCT GCTGGCGATC AGCTTTGCCG GCGCCTGGCT GACCTCCGAG 
AGCGAGCGCT GGCACCTGGC GCACATCACC TTCGGCTACA CGATGGCGGG GCTGGTGGCC 
TTCCGGCTGG TGTGGGGGCT GGTGGGCACG CGGCATGCGC GTTTTGCCTC GTTCGTGCGC 
GCACCGGCCG CCGCCTGGCG CTATCTGAAA TCGCTCGTCA CGCCGACGCC CGAGCACCCG 
ATCGGCCACA ACCCGGCCGG CGCGCTGGCG ATCGTCGGCC TGCTGGCGCT GATCGCCCTG 
ACCACCGCCA CCGGCTGGGC CAACGAGAAC GACCTGGCCG GCGACTGGCT CGAGGAGCTG 
CACGAACTCG GCGCCAACGC CCTGATGCTG CTGGTGCTGG TGCACCTGGT CGGCGTGGCG 
GTGGGCAGCC TGATGCACCG CGAGAACCTG GTGCGCAGCA TGATCACCGG CATGAAACGC 
GGCCCGGCCG CACAAGGCAT CACGCGCTCG TGGCGCTGGC TGGGCGCGCT GGTGCTGCTG 
GCGGTGCTGG GTTTCTGGGG CCTGCAATGG CAGACTGCGC CGACCCCGGA GCAGCTGGCC 
GAGGCCACCT CGGCCGGCCA GTCCGGCCGT GACCATGACG ACGACGATTG A
 
Protein sequence
MSTHTSPCEP TGRVLVWDLP VRVFHWLLAI SFAGAWLTSE SERWHLAHIT FGYTMAGLVA 
FRLVWGLVGT RHARFASFVR APAAAWRYLK SLVTPTPEHP IGHNPAGALA IVGLLALIAL 
TTATGWANEN DLAGDWLEEL HELGANALML LVLVHLVGVA VGSLMHRENL VRSMITGMKR 
GPAAQGITRS WRWLGALVLL AVLGFWGLQW QTAPTPEQLA EATSAGQSGR DHDDDD