Gene Lcho_2983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2983 
Symbol 
ID6161442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp3286623 
End bp3287438 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content71% 
IMG OID641665760 
Producthypothetical protein 
Protein accessionYP_001792010 
Protein GI171059661 
COG category[S] Function unknown 
COG ID[COG4643] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones90 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG CCGACCACTT CGAGGCCTTC ATGCGCTCGG TCGGCCTGGC GCCGGCCAAG 
CCGCTGAATC TGACAGACGG CAAGCTCGAA CGCTTCCGCG TGGAGGGCGA CAAATCCGGC
TCCCGCAACG GCTGGGCCGT GATGTACAGC CACCCCGACG TGTGGGGCGT GGTCGGTTCC
TGGCGCACCG GTGAACAGCA CAGCTGGCGC GAGCTGGTGC GCCAGCACAT GACCGCGCAG
GAACGCCGCC AGCTGCAGCT GCAGCGCGAG CAGGCGACCG CGGCGCGGCT GGCCGATCAG
CAGCGGGCCC ACGCCGAAGC GCAGGCCAAG GCGCTGAAGC TGTGGCGTCT GGCCAGGCCG
GCGATCGACG CGCATCCCTA CCTGCAGCGC AAACGCGTAC ACGCCTATGG CTTGCGCCAG
CTGGGCGAGC GCCTGCTGGT GCCGGCGCGT GACCGCCAGG GCGAGCTGCA CACGCTGCAG
TTCATCGACG CCGACGGCAC CAAGCGCTTC CTGACCGGCG GGCGCATCGG CGGCTGTTAC
TGCGCCATCG GCGAGCCCCG TGACGGGCTG CTGGTGTGCG AGGGCTACGC GACGGCGGCG
ACGCTGTTCG ATGCCACCGG CATAGCCACG GCTGCGGCTT TTTCGGCCGG CAACCTGGCG
CGGGTGGCGG TGGCGCTGCG ATCGAAGTTC CCGCAGGCCC GCATCGGGAT CTGTGGCGAC
CGCGACGACA GCGGCACCGG CCAGGCCGCA GCGATCGAGG CGGCGCGTGC GGTCGGTGGC
CTGGTGGCGC TGCCGACCTT CGGAGGTAGC CAATGA
 
Protein sequence
MSAADHFEAF MRSVGLAPAK PLNLTDGKLE RFRVEGDKSG SRNGWAVMYS HPDVWGVVGS 
WRTGEQHSWR ELVRQHMTAQ ERRQLQLQRE QATAARLADQ QRAHAEAQAK ALKLWRLARP
AIDAHPYLQR KRVHAYGLRQ LGERLLVPAR DRQGELHTLQ FIDADGTKRF LTGGRIGGCY
CAIGEPRDGL LVCEGYATAA TLFDATGIAT AAAFSAGNLA RVAVALRSKF PQARIGICGD
RDDSGTGQAA AIEAARAVGG LVALPTFGGS Q