| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2941 |
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| Symbol | |
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| ID | 6159734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3243124 |
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| End bp | 3243834 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641665720 |
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| Product | protein TolQ |
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| Protein accession | YP_001791971 |
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| Protein GI | 171059622 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | [TIGR02796] TolQ protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAGG ACCTGAATAT CCTGCACCTC ATCACCCAGG CCAGCTTTGT GGTCCAGCTG
GTGATGGCGA CACTGATGCT GGTTTCGCTG GCGAGCTGGG CCGTGATCTT CGGCAAGCTG
ATCGGCCTGC GCCGGGTGCG CGGCGCCAAC GACGGCTTCG AGCGCGAGTT CTGGTCGGGC
CGCAACGTCC AGGAGCTCTA CGCCCACAGC GAGCGCAACG CCGAGATCGG CGCGCCGCTC
GAACGCATCT TCGCGTCGGG CATGCGCGAG TTCCTGAAGC TGCGCGAGCG CCGCGTCGGC
GATGCCGGCT CGCTGCTCGA CGGCGCGCGC CGCGCCATGC GCGCGAGCCT GCAGCGCGAG
ATGGACGCGG TCGAGCACAA CCTGTCGTTC CTGGCCACGG TCGGCTCGGT GTCGCCGTAC
GTGGGCCTGT TCGGCACGGT GTGGGGGATC ATGCATGCCT TCACCGGCCT GGCCAACGTG
CAGCAGGTGT CGCTGGCCAC CGTCGCGCCC GGCATCGCCG AGGCCCTGGT GGCGACCGCG
ATCGGCCTGT TCGCGGCCAT CCCGGCGGTG ATCGCCTACA ACCGCTTCTC GCGCGACATC
GACCGCATCG CGATCCAGCT CGAGACCTTC GTCGAGGAGT TCTCCAACAT CCTGGCGCGC
AACATCGGCC AGGGCGCGGG CGCGGGTGCC TCGGCGCCCA ACACGCGCTG A
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| Protein sequence | MNQDLNILHL ITQASFVVQL VMATLMLVSL ASWAVIFGKL IGLRRVRGAN DGFEREFWSG
RNVQELYAHS ERNAEIGAPL ERIFASGMRE FLKLRERRVG DAGSLLDGAR RAMRASLQRE
MDAVEHNLSF LATVGSVSPY VGLFGTVWGI MHAFTGLANV QQVSLATVAP GIAEALVATA
IGLFAAIPAV IAYNRFSRDI DRIAIQLETF VEEFSNILAR NIGQGAGAGA SAPNTR
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